This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4et9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:06, 16 August 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Hen egg-white lysozyme solved from 5 fs free-electron laser pulse data==
==Hen egg-white lysozyme solved from 5 fs free-electron laser pulse data==
-
<StructureSection load='4et9' size='340' side='right' caption='[[4et9]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='4et9' size='340' side='right'caption='[[4et9]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4et9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ET9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ET9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4et9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ET9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ET9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4et8|4et8]], [[4eta|4eta]], [[4etb|4etb]], [[4etc|4etc]], [[4etd|4etd]], [[4ete|4ete]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4et9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4et9 OCA], [https://pdbe.org/4et9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4et9 RCSB], [https://www.ebi.ac.uk/pdbsum/4et9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4et9 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4et9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4et9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4et9 RCSB], [http://www.ebi.ac.uk/pdbsum/4et9 PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4et9" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 26: Line 27:
</StructureSection>
</StructureSection>
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
-
[[Category: Lysozyme]]
+
[[Category: Large Structures]]
-
[[Category: Aquila, A]]
+
[[Category: Aquila A]]
-
[[Category: Arnlund, D]]
+
[[Category: Arnlund D]]
-
[[Category: Bakel, N van]]
+
[[Category: Barends T]]
-
[[Category: Barends, T]]
+
[[Category: Barty A]]
-
[[Category: Barty, A]]
+
[[Category: Bogan M]]
-
[[Category: Bogan, M]]
+
[[Category: Boutet S]]
-
[[Category: Boutet, S]]
+
[[Category: Calemann C]]
-
[[Category: Calemann, C]]
+
[[Category: Chapman H]]
-
[[Category: Chapman, H]]
+
[[Category: DePonte D]]
-
[[Category: DePonte, D]]
+
[[Category: Defever K]]
-
[[Category: Defever, K]]
+
[[Category: Doak RB]]
-
[[Category: Doak, R B]]
+
[[Category: Fromme P]]
-
[[Category: Fromme, P]]
+
[[Category: Fromme R]]
-
[[Category: Fromme, R]]
+
[[Category: Ghonsalves W]]
-
[[Category: Ghonsalves, W]]
+
[[Category: Gruner S]]
-
[[Category: Gruner, S]]
+
[[Category: Haller G]]
-
[[Category: Haller, G]]
+
[[Category: Hampton C]]
-
[[Category: Hampton, C]]
+
[[Category: Hart P]]
-
[[Category: Hart, P]]
+
[[Category: Herbst R]]
-
[[Category: Herbst, R]]
+
[[Category: Hromalik M]]
-
[[Category: Hromalik, M]]
+
[[Category: Hunter M]]
-
[[Category: Hunter, M]]
+
[[Category: Johansson L]]
-
[[Category: Johansson, L]]
+
[[Category: Kassemeyer S]]
-
[[Category: Kassemeyer, S]]
+
[[Category: Katona G]]
-
[[Category: Katona, G]]
+
[[Category: Kenney C]]
-
[[Category: Kenney, C]]
+
[[Category: Kirian R]]
-
[[Category: Kirian, R]]
+
[[Category: Koerner L]]
-
[[Category: Koerner, L]]
+
[[Category: Kupitz C]]
-
[[Category: Kupitz, C]]
+
[[Category: Liang M]]
-
[[Category: Liang, M]]
+
[[Category: Lomb L]]
-
[[Category: Lomb, L]]
+
[[Category: Martin A]]
-
[[Category: Martin, A]]
+
[[Category: Messerschmidt M]]
-
[[Category: Messerschmidt, M]]
+
[[Category: Montanez P]]
-
[[Category: Montanez, P]]
+
[[Category: Morse J]]
-
[[Category: Morse, J]]
+
[[Category: Nass K]]
-
[[Category: Nass, K]]
+
[[Category: Neutze R]]
-
[[Category: Neutze, R]]
+
[[Category: Philllip H]]
-
[[Category: Philllip, H]]
+
[[Category: Pines J]]
-
[[Category: Pines, J]]
+
[[Category: Redecke L]]
-
[[Category: Redecke, L]]
+
[[Category: Schafer D]]
-
[[Category: Schafer, D]]
+
[[Category: Schlichting I]]
-
[[Category: Schlichting, I]]
+
[[Category: Seibert M]]
-
[[Category: Seibert, M]]
+
[[Category: Shoeman R]]
-
[[Category: Shoeman, R]]
+
[[Category: Spence J]]
-
[[Category: Spence, J]]
+
[[Category: Steinbrener J]]
-
[[Category: Steinbrener, J]]
+
[[Category: Stellato F]]
-
[[Category: Stellato, F]]
+
[[Category: Tate M]]
-
[[Category: Tate, M]]
+
[[Category: Timneanu N]]
-
[[Category: Timneanu, N]]
+
[[Category: Wang D]]
-
[[Category: Wang, D]]
+
[[Category: Weierstall U]]
-
[[Category: Weierstall, U]]
+
[[Category: White T]]
-
[[Category: White, T]]
+
[[Category: Williams G]]
-
[[Category: Williams, G]]
+
[[Category: Zatsepin N]]
-
[[Category: Zatsepin, N]]
+
[[Category: Van Bakel N]]
-
[[Category: Hydrolase]]
+

Current revision

Hen egg-white lysozyme solved from 5 fs free-electron laser pulse data

PDB ID 4et9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools