2w0c

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==X-RAY STRUCTURE OF THE ENTIRE LIPID-CONTAINING BACTERIOPHAGE PM2==
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<StructureSection load='2w0c' size='340' side='right' caption='[[2w0c]], [[Resolution|resolution]] 7.00&Aring;' scene=''>
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==X-ray structure of the entire lipid-containing bacteriophage PM2==
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<SX load='2w0c' size='340' side='right' viewer='molstar' caption='[[2w0c]], [[Resolution|resolution]] 7.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2w0c]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudoalteromonas_phage_pm2 Pseudoalteromonas phage pm2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W0C FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2w0c]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudoalteromonas_virus_PM2 Pseudoalteromonas virus PM2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W0C FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vvf|2vvf]], [[2vvd|2vvd]], [[2vve|2vve]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w0c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w0c RCSB], [http://www.ebi.ac.uk/pdbsum/2w0c PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w0c OCA], [https://pdbe.org/2w0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w0c RCSB], [https://www.ebi.ac.uk/pdbsum/2w0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w0c ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CAPSD_BPPM2 CAPSD_BPPM2]] Major capsid protein. [[http://www.uniprot.org/uniprot/SPIKE_BPPM2 SPIKE_BPPM2]] Receptor binding protein located at the fivefold vertices.
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[https://www.uniprot.org/uniprot/CAPSD_BPPM2 CAPSD_BPPM2] Major capsid protein.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w0/2w0c_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w0/2w0c_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w0c ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 2w0c" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
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</StructureSection>
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</SX>
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[[Category: Pseudoalteromonas phage pm2]]
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[[Category: Large Structures]]
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[[Category: Abrescia, N G.A]]
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[[Category: Pseudoalteromonas virus PM2]]
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[[Category: Assenberg, R]]
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[[Category: Abrescia NGA]]
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[[Category: Bamford, D H]]
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[[Category: Assenberg R]]
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[[Category: Bamford, J K.H]]
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[[Category: Bamford DH]]
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[[Category: Butcher, S J]]
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[[Category: Bamford JKH]]
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[[Category: Grimes, J M]]
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[[Category: Butcher SJ]]
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[[Category: Kivela, H M]]
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[[Category: Grimes JM]]
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[[Category: Stuart, D I]]
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[[Category: Kivela HM]]
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[[Category: Sutton, G C]]
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[[Category: Stuart DI]]
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[[Category: Capsid protein]]
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[[Category: Sutton GC]]
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[[Category: Member of prd1-adeno viral lineage]]
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[[Category: Membrane]]
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[[Category: Membrane-containing bacteriophage]]
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[[Category: Transmembrane]]
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[[Category: Virus]]
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[[Category: Virus virion]]
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Current revision

X-ray structure of the entire lipid-containing bacteriophage PM2

2w0c, resolution 7.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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