This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4np9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:24, 29 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of Rabphilin C2A domain bound to IP3==
==Structure of Rabphilin C2A domain bound to IP3==
-
<StructureSection load='4np9' size='340' side='right' caption='[[4np9]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
+
<StructureSection load='4np9' size='340' side='right'caption='[[4np9]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4np9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NP9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NP9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4np9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NP9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NP9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=I3P:D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE'>I3P</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ns0|4ns0]], [[2chd|2chd]], [[2k3h|2k3h]], [[2cm5|2cm5]], [[2cm6|2cm6]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=I3P:D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE'>I3P</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rph3a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4np9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np9 OCA], [https://pdbe.org/4np9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4np9 RCSB], [https://www.ebi.ac.uk/pdbsum/4np9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4np9 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4np9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4np9 RCSB], [http://www.ebi.ac.uk/pdbsum/4np9 PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RP3A_RAT RP3A_RAT]] Protein transport. Probably involved with Ras-related protein Rab-3A in synaptic vesicle traffic and/or synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal.
+
[https://www.uniprot.org/uniprot/RP3A_RAT RP3A_RAT] Protein transport. Probably involved with Ras-related protein Rab-3A in synaptic vesicle traffic and/or synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4np9" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Exophilin|Exophilin]]
 +
*[[Exophilin 3D structures|Exophilin 3D structures]]
 +
*[[Rabphilin|Rabphilin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
+
[[Category: Large Structures]]
-
[[Category: Buxaderas, M]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Corbalan-Garcia, S]]
+
[[Category: Buxaderas M]]
-
[[Category: Ferrer-Orta, C]]
+
[[Category: Corbalan-Garcia S]]
-
[[Category: Gomez-Fernandez, J C]]
+
[[Category: Ferrer-Orta C]]
-
[[Category: Guerra, P]]
+
[[Category: Gomez-Fernandez JC]]
-
[[Category: Guerrero-Valero, M]]
+
[[Category: Guerra P]]
-
[[Category: Guillen, J]]
+
[[Category: Guerrero-Valero M]]
-
[[Category: Luengo-Gil, G]]
+
[[Category: Guillen J]]
-
[[Category: Perez-Sanchez, D]]
+
[[Category: Luengo-Gil G]]
-
[[Category: Pous, J]]
+
[[Category: Perez-Sanchez D]]
-
[[Category: Verdaguer, N]]
+
[[Category: Pous J]]
-
[[Category: C-2 domain fold]]
+
[[Category: Verdaguer N]]
-
[[Category: C2 domain]]
+
-
[[Category: C2a]]
+
-
[[Category: Calcium binding]]
+
-
[[Category: Exophilin-1]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Rabphilin-3a]]
+
-
[[Category: Synaptic exocytosis metal-binding]]
+

Current revision

Structure of Rabphilin C2A domain bound to IP3

PDB ID 4np9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4np9"
Personal tools