This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4utw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:36, 10 January 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structural characterisation of NanE, ManNac6P C2 epimerase, from Clostridium perfingens==
==Structural characterisation of NanE, ManNac6P C2 epimerase, from Clostridium perfingens==
-
<StructureSection load='4utw' size='340' side='right' caption='[[4utw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='4utw' size='340' side='right'caption='[[4utw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4utw]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4utw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens_str._13 Clostridium perfringens str. 13]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UTW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=RFW:N-ACETYL-D-GLUCOSAMINE-6-PHOSPHATE'>RFW</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4utt|4utt]], [[4utu|4utu]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=RFW:N-ACETYL-D-GLUCOSAMINE-6-PHOSPHATE'>RFW</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acylglucosamine-6-phosphate_2-epimerase N-acylglucosamine-6-phosphate 2-epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.9 5.1.3.9] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4utw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utw OCA], [https://pdbe.org/4utw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4utw RCSB], [https://www.ebi.ac.uk/pdbsum/4utw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4utw ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4utw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4utw RCSB], [http://www.ebi.ac.uk/pdbsum/4utw PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NANE_CLOP1 NANE_CLOP1]] Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P).
+
[https://www.uniprot.org/uniprot/NANE_CLOPE NANE_CLOPE] Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4utw" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: N-acylglucosamine-6-phosphate 2-epimerase]]
+
[[Category: Clostridium perfringens str. 13]]
-
[[Category: Bourne, Y]]
+
[[Category: Large Structures]]
-
[[Category: Brannigan, J A]]
+
[[Category: Bourne Y]]
-
[[Category: Davies, G J]]
+
[[Category: Brannigan JA]]
-
[[Category: Guerlesquin, F]]
+
[[Category: Davies GJ]]
-
[[Category: Pelissier, M C]]
+
[[Category: Guerlesquin F]]
-
[[Category: Sebban-Kreuzer, C]]
+
[[Category: Pelissier MC]]
-
[[Category: Vincent, F]]
+
[[Category: Sebban-Kreuzer C]]
-
[[Category: 1h nmr spectroscopy]]
+
[[Category: Vincent F]]
-
[[Category: Carbohydrate]]
+
-
[[Category: Enzyme mechanism]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Mutagenesis]]
+
-
[[Category: Sialic acid]]
+
-
[[Category: Sugar 2-epimerase]]
+
-
[[Category: Sugar phosphate]]
+

Current revision

Structural characterisation of NanE, ManNac6P C2 epimerase, from Clostridium perfingens

PDB ID 4utw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4utw"
Personal tools