4twl

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'''Unreleased structure'''
 
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The entry 4twl is ON HOLD until Paper Publication
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==Crystal structure of dioscorin complexed with ascorbate==
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<StructureSection load='4twl' size='340' side='right'caption='[[4twl]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
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Authors: Xue, Y.L., Miyakawa, T., Nakamura, A., Tanokura, M.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4twl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Dioscorea_japonica Dioscorea japonica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TWL FirstGlance]. <br>
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Description: Crystal structure of dioscorin complexed with ascorbate
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASC:ASCORBIC+ACID'>ASC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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[[Category: Xue, Y.L]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4twl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4twl OCA], [https://pdbe.org/4twl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4twl RCSB], [https://www.ebi.ac.uk/pdbsum/4twl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4twl ProSAT]</span></td></tr>
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[[Category: Tanokura, M]]
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</table>
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[[Category: Miyakawa, T]]
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== Function ==
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[[Category: Nakamura, A]]
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[https://www.uniprot.org/uniprot/DIOA3_DIOJA DIOA3_DIOJA] Storage protein of tuber. Involved in protection against oxidative stress (Probable). Has carbonate dehydratase, trypsin inhibitor, dehydroascorbate (DHA) reductase and monodehydroascorbate (MDA) reductase activities (PubMed:22195572). Catalyzes the reactions of carbonate dehydratase and DHA reductase independently of zinc and glutathione (GSH). The coupled reaction is capable of recycling a plant antioxidant ascorbate using ubiquitous compounds H(2)O and CO(2) (PubMed:25747844). Exhibits antioxidant activity. Able to scavenge 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical. Exhibits immunomodulatory activity. Activates Toll-like receptor 4 signaling pathways by up-regulating the gene expression of pro-inflammatory cytokines, such as tumor necrosis factor alpha, interleukin-1 beta and interleukin-6, and chemokines RANTES and MCP-1, in mouse RAW 264.7 macrophages. Stimulates the phagocytosis of E.coli by the LPS-treated mouse macrophages (PubMed:22796748).<ref>PMID:22195572</ref> <ref>PMID:22796748</ref> <ref>PMID:25747844</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Dioscorea japonica]]
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[[Category: Large Structures]]
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[[Category: Miyakawa T]]
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[[Category: Nakamura A]]
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[[Category: Tanokura M]]
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[[Category: Xue YL]]

Current revision

Crystal structure of dioscorin complexed with ascorbate

PDB ID 4twl

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