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1xu6
From Proteopedia
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==Structure of the C-terminal domain from Trypanosoma brucei Variant Surface Glycoprotein MITat1.2== | ==Structure of the C-terminal domain from Trypanosoma brucei Variant Surface Glycoprotein MITat1.2== | ||
| - | <StructureSection load='1xu6' size='340' side='right' caption='[[1xu6 | + | <StructureSection load='1xu6' size='340' side='right'caption='[[1xu6]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1xu6]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1xu6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei_brucei Trypanosoma brucei brucei]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XU6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XU6 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xu6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xu6 OCA], [https://pdbe.org/1xu6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xu6 RCSB], [https://www.ebi.ac.uk/pdbsum/1xu6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xu6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/VSM2_TRYBB VSM2_TRYBB] VSG forms a coat on the surface of the parasite. The trypanosome evades the immune response of the host by expressing a series of antigenically distinct VSGs from an estimated 1000 VSG genes. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xu/1xu6_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xu/1xu6_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xu6 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 1xu6" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Trypanosoma]] | + | [[Category: Large Structures]] |
| - | [[Category: Carrington | + | [[Category: Trypanosoma brucei brucei]] |
| - | [[Category: Chattopadhyay | + | [[Category: Carrington M]] |
| - | [[Category: Jones | + | [[Category: Chattopadhyay A]] |
| - | [[Category: Mott | + | [[Category: Jones NG]] |
| - | [[Category: Nielsen | + | [[Category: Mott HR]] |
| - | [[Category: Nietlispach | + | [[Category: Nielsen PR]] |
| - | [[Category: Voorheis | + | [[Category: Nietlispach D]] |
| - | + | [[Category: Voorheis HP]] | |
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| - | + | ||
Current revision
Structure of the C-terminal domain from Trypanosoma brucei Variant Surface Glycoprotein MITat1.2
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