4uek

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'''Unreleased structure'''
 
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The entry 4uek is ON HOLD until Paper Publication
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==Galactitol-1-phosphate 5-dehydrogenase from E. coli with Tris within the active site.==
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<StructureSection load='4uek' size='340' side='right'caption='[[4uek]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4uek]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UEK FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4uek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4uek OCA], [https://pdbe.org/4uek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4uek RCSB], [https://www.ebi.ac.uk/pdbsum/4uek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4uek ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GATD_ECOLI GATD_ECOLI] Converts galactitol 1-phosphate to tagatose 6-phosphate.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Galactitol-1-phosphate 5-dehydrogenase (GPDH) is a polyol dehydrogenase that belongs to the medium-chain dehydrogenase/reductase (MDR) superfamily. It catalyses the Zn(2+)- and NAD(+)-dependent stereoselective dehydrogenation of L-galactitol 1-phosphate to D-tagatose 6-phosphate. Here, three crystal structures of GPDH from Escherichia coli are reported: that of the open state of GPDH with Zn(2+) in the catalytic site and those of the closed state in complex with the polyols Tris and glycerol, respectively. The closed state of GPDH reveals no bound cofactor, which is at variance with the conformational transition of the prototypical mammalian liver alcohol dehydrogenase. The main intersubunit-contacting interface within the GPDH homodimer presents a large internal cavity that probably facilitates the relative movement between the subunits. The substrate analogue glycerol bound within the active site partially mimics the catalytically relevant backbone of galactitol 1-phosphate. The glycerol binding mode reveals, for the first time in the polyol dehydrogenases, a pentacoordinated zinc ion in complex with a polyol and also a strong hydrogen bond between the primary hydroxyl group and the conserved Glu144, an interaction originally proposed more than thirty years ago that supports a catalytic role for this acidic residue.
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Authors: Benavente, R., Esteban-Torres, M., Kohring, G.W., Cortes-Cabrera, A., Gago, F., Acebron, I., delasRivas, B., Munoz, R., Mancheno, J.M.
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Enantioselective oxidation of galactitol 1-phosphate by galactitol-1-phosphate 5-dehydrogenase from Escherichia coli.,Benavente R, Esteban-Torres M, Kohring GW, Cortes-Cabrera A, Sanchez-Murcia PA, Gago F, Acebron I, de Las Rivas B, Munoz R, Mancheno JM Acta Crystallogr D Biol Crystallogr. 2015 Jul 1;71(Pt 7):1540-54. doi:, 10.1107/S1399004715009281. Epub 2015 Jun 30. PMID:26143925<ref>PMID:26143925</ref>
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Description: Galactitol-1-phosphate 5-dehydrogenase from E. coli with Tris within the active site.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Benavente, R]]
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<div class="pdbe-citations 4uek" style="background-color:#fffaf0;"></div>
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[[Category: Acebron, I]]
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== References ==
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[[Category: Esteban-Torres, M]]
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<references/>
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[[Category: Cortes-Cabrera, A]]
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__TOC__
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[[Category: Mancheno, J.M]]
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</StructureSection>
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[[Category: Kohring, G.W]]
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[[Category: Escherichia coli]]
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[[Category: Munoz, R]]
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[[Category: Large Structures]]
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[[Category: Delasrivas, B]]
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[[Category: Acebron I]]
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[[Category: Gago, F]]
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[[Category: Benavente R]]
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[[Category: Cortes-Cabrera A]]
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[[Category: Esteban-Torres M]]
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[[Category: Gago F]]
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[[Category: Kohring GW]]
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[[Category: Mancheno JM]]
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[[Category: Munoz R]]
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[[Category: De las Rivas B]]

Current revision

Galactitol-1-phosphate 5-dehydrogenase from E. coli with Tris within the active site.

PDB ID 4uek

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