This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1w3z
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | == | + | |
| - | <StructureSection load='1w3z' size='340' side='right' caption='[[1w3z]], [[Resolution|resolution]] 3.20Å' scene=''> | + | ==SeMet derivative of BbCRASP-1 from Borrelia Burgdorferi== |
| + | <StructureSection load='1w3z' size='340' side='right'caption='[[1w3z]], [[Resolution|resolution]] 3.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1w3z]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1w3z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Borreliella_burgdorferi_ZS7 Borreliella burgdorferi ZS7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W3Z FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w3z OCA], [https://pdbe.org/1w3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w3z RCSB], [https://www.ebi.ac.uk/pdbsum/1w3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w3z ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O50957_BORBU O50957_BORBU] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w3/1w3z_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w3/1w3z_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1w3z ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 25: | Line 28: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 1w3z" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| + | *[[Complement Regulator-Acquiring Surface Protein|Complement Regulator-Acquiring Surface Protein]] | ||
*[[Complement regulator-acquiring surface protein|Complement regulator-acquiring surface protein]] | *[[Complement regulator-acquiring surface protein|Complement regulator-acquiring surface protein]] | ||
== References == | == References == | ||
| Line 32: | Line 37: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Borreliella burgdorferi ZS7]] |
| - | [[Category: Brade | + | [[Category: Large Structures]] |
| - | [[Category: Cordes | + | [[Category: Brade V]] |
| - | [[Category: Goodstadt | + | [[Category: Cordes FS]] |
| - | [[Category: Kirschfink | + | [[Category: Goodstadt L]] |
| - | [[Category: Kraiczy | + | [[Category: Kirschfink M]] |
| - | [[Category: Lea | + | [[Category: Kraiczy P]] |
| - | [[Category: Ponting | + | [[Category: Lea SM]] |
| - | [[Category: Roversi | + | [[Category: Ponting C]] |
| - | [[Category: Simon | + | [[Category: Roversi P]] |
| - | [[Category: Skerka | + | [[Category: Simon MM]] |
| - | [[Category: Wallich | + | [[Category: Skerka C]] |
| - | [[Category: Zipfel | + | [[Category: Wallich R]] |
| - | + | [[Category: Zipfel P]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
SeMet derivative of BbCRASP-1 from Borrelia Burgdorferi
| |||||||||||
Categories: Borreliella burgdorferi ZS7 | Large Structures | Brade V | Cordes FS | Goodstadt L | Kirschfink M | Kraiczy P | Lea SM | Ponting C | Roversi P | Simon MM | Skerka C | Wallich R | Zipfel P

