1yya

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:38, 13 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yya.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of TT0473, putative Triosephosphate Isomerase from Thermus thermophilus HB8==
-
|PDB= 1yya |SIZE=350|CAPTION= <scene name='initialview01'>1yya</scene>, resolution 1.6&Aring;
+
<StructureSection load='1yya' size='340' side='right'caption='[[1yya]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> and <scene name='pdbligand=PO4:PHOSPHATE ION'>PO4</scene>
+
<table><tr><td colspan='2'>[[1yya]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YYA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YYA FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Triose-phosphate_isomerase Triose-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.1 5.3.1.1]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yya OCA], [https://pdbe.org/1yya PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yya RCSB], [https://www.ebi.ac.uk/pdbsum/1yya PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yya ProSAT], [https://www.topsan.org/Proteins/RSGI/1yya TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of TT0473, putative Triosephosphate Isomerase from Thermus thermophilus HB8'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/TPIS_THET8 TPIS_THET8]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1YYA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YYA OCA].
+
Check<jmol>
-
[[Category: Single protein]]
+
<jmolCheckbox>
-
[[Category: Thermus thermophilus]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/1yya_consurf.spt"</scriptWhenChecked>
-
[[Category: Triose-phosphate isomerase]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Kunishima, N.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
</jmolCheckbox>
-
[[Category: Yamamoto, H.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yya ConSurf].
-
[[Category: NA]]
+
<div style="clear:both"></div>
-
[[Category: PO4]]
+
__TOC__
-
[[Category: riken structural genomics/proteomics initiative]]
+
</StructureSection>
-
[[Category: rsgi]]
+
[[Category: Large Structures]]
-
[[Category: structural genomic]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: triosephosphate isomerase]]
+
[[Category: Kunishima N]]
-
 
+
[[Category: Yamamoto H]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:29:01 2008''
+

Current revision

Crystal structure of TT0473, putative Triosephosphate Isomerase from Thermus thermophilus HB8

PDB ID 1yya

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yya"
Personal tools