1xqb
From Proteopedia
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==X-Ray Structure Of YaeB from Haemophilus influenzae. Northeast Structural Genomics Research Consortium (NESGC)target IR47.== | ==X-Ray Structure Of YaeB from Haemophilus influenzae. Northeast Structural Genomics Research Consortium (NESGC)target IR47.== | ||
| - | <StructureSection load='1xqb' size='340' side='right' caption='[[1xqb]], [[Resolution|resolution]] 2.85Å' scene=''> | + | <StructureSection load='1xqb' size='340' side='right'caption='[[1xqb]], [[Resolution|resolution]] 2.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1xqb]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1xqb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XQB FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xqb OCA], [https://pdbe.org/1xqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xqb RCSB], [https://www.ebi.ac.uk/pdbsum/1xqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xqb ProSAT], [https://www.topsan.org/Proteins/NESGC/1xqb TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/TRMO_HAEIN TRMO_HAEIN] S-adenosyl-L-methionine-dependent methyltransferase responsible for the addition of the methyl group in the formation of N6-methyl-N6-threonylcarbamoyladenosine at position 37 (m(6)t(6)A37) of the tRNA anticodon loop of tRNA(Thr)(GGU). The methyl group of m(6)t(6)A37 appears to slightly improve the efficiency of the tRNA decoding ability. Binds to tRNA.[UniProtKB:P28634] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xq/1xqb_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xq/1xqb_consurf.spt"</scriptWhenChecked> |
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xqb ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Haemophilus influenzae]] | [[Category: Haemophilus influenzae]] | ||
| - | [[Category: Acton | + | [[Category: Large Structures]] |
| - | [[Category: Benach | + | [[Category: Acton T]] |
| - | [[Category: Forouhar | + | [[Category: Benach J]] |
| - | [[Category: Hunt | + | [[Category: Forouhar F]] |
| - | [[Category: Itkin | + | [[Category: Hunt JF]] |
| - | [[Category: Keller | + | [[Category: Itkin A]] |
| - | [[Category: Kuzin | + | [[Category: Keller JP]] |
| - | [[Category: Lee | + | [[Category: Kuzin AP]] |
| - | [[Category: Montelione | + | [[Category: Lee I]] |
| - | + | [[Category: Montelione GT]] | |
| - | [[Category: Xiao | + | [[Category: Xiao R]] |
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Current revision
X-Ray Structure Of YaeB from Haemophilus influenzae. Northeast Structural Genomics Research Consortium (NESGC)target IR47.
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Categories: Haemophilus influenzae | Large Structures | Acton T | Benach J | Forouhar F | Hunt JF | Itkin A | Keller JP | Kuzin AP | Lee I | Montelione GT | Xiao R
