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4miw
From Proteopedia
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==High-resolution structure of the N-terminal endonuclease domain of the Lassa virus L polymerase== | ==High-resolution structure of the N-terminal endonuclease domain of the Lassa virus L polymerase== | ||
| - | <StructureSection load='4miw' size='340' side='right' caption='[[4miw]], [[Resolution|resolution]] 1.72Å' scene=''> | + | <StructureSection load='4miw' size='340' side='right'caption='[[4miw]], [[Resolution|resolution]] 1.72Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4miw]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4miw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lassa_mammarenavirus Lassa mammarenavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MIW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MIW FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4miw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4miw OCA], [https://pdbe.org/4miw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4miw RCSB], [https://www.ebi.ac.uk/pdbsum/4miw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4miw ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/Q6GWS2_LASSJ Q6GWS2_LASSJ] RNA-dependent RNA polymerase, which is responsible for the replication and transcription of the viral RNA genome using antigenomic RNA as an intermediate. During transcription, synthesizes subgenomic RNAs and assures their capping by a cap-snatching mechanism, which involves the endonuclease activity cleaving the host capped pre-mRNAs. These short capped RNAs are then used as primers for viral transcription. The 3'-end of subgenomic mRNAs molecules are heterogeneous and not polyadenylated. The replicase function is to direct synthesis of antigenomic and genomic RNA which are encapsidated and non capped. As a consequence of the use of the same enzyme for both transcription and replication, these mechanisms need to be well coordinated. These processes may be regulated by proteins N and Z in a dose-dependent manner.[HAMAP-Rule:MF_04086][PIRNR:PIRNR000836] |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 4miw" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[RNA polymerase|RNA polymerase]] | + | *[[RNA polymerase 3D structures|RNA polymerase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Lassa mammarenavirus]] |
| - | [[Category: Dong | + | [[Category: Dong C]] |
| - | [[Category: Dong | + | [[Category: Dong H]] |
| - | [[Category: Huang | + | [[Category: Huang Q]] |
| - | [[Category: Liang | + | [[Category: Liang Y]] |
| - | [[Category: Ly | + | [[Category: Ly H]] |
| - | [[Category: Wallat | + | [[Category: Wallat GD]] |
| - | [[Category: Wang | + | [[Category: Wang W]] |
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Current revision
High-resolution structure of the N-terminal endonuclease domain of the Lassa virus L polymerase
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Categories: Large Structures | Lassa mammarenavirus | Dong C | Dong H | Huang Q | Liang Y | Ly H | Wallat GD | Wang W
