This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cp0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:28, 22 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of the 1st CAP-Gly domain in human CLIP-170-related protein CLIPR59==
==Solution structure of the 1st CAP-Gly domain in human CLIP-170-related protein CLIPR59==
-
<StructureSection load='2cp0' size='340' side='right' caption='[[2cp0]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2cp0' size='340' side='right'caption='[[2cp0]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2cp0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CP0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CP0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2cp0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CP0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CP0 FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">IOH13590 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cp0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cp0 RCSB], [http://www.ebi.ac.uk/pdbsum/2cp0 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cp0 TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cp0 OCA], [https://pdbe.org/2cp0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cp0 RCSB], [https://www.ebi.ac.uk/pdbsum/2cp0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cp0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cp0 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CLIP3_HUMAN CLIP3_HUMAN]] Functions as a cytoplasmic linker protein. Involved in TGN-endosome dynamics.
+
[https://www.uniprot.org/uniprot/CLIP3_HUMAN CLIP3_HUMAN] Functions as a cytoplasmic linker protein. Involved in TGN-endosome dynamics.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cp/2cp0_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cp/2cp0_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cp0 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
- 
-
==See Also==
 
-
*[[CAP-Gly domain|CAP-Gly domain]]
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Inoue, M]]
+
[[Category: Large Structures]]
-
[[Category: Kigawa, T]]
+
[[Category: Inoue M]]
-
[[Category: Koshiba, S]]
+
[[Category: Kigawa T]]
-
[[Category: Structural genomic]]
+
[[Category: Koshiba S]]
-
[[Category: Saito, K]]
+
[[Category: Saito K]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: Cytoskeleton associated protein]]
+
-
[[Category: Microtubule binding]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Rsgi]]
+

Current revision

Solution structure of the 1st CAP-Gly domain in human CLIP-170-related protein CLIPR59

PDB ID 2cp0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2cp0"
Personal tools