2vbj

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==Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers==
==Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers==
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<StructureSection load='2vbj' size='340' side='right' caption='[[2vbj]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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<StructureSection load='2vbj' size='340' side='right'caption='[[2vbj]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2vbj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VBJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VBJ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2vbj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VBJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VBJ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1g9z|1g9z]], [[1bp7|1bp7]], [[2vbl|2vbl]], [[1af5|1af5]], [[2vbo|2vbo]], [[1mow|1mow]], [[1g9y|1g9y]], [[2vbn|2vbn]], [[1n3f|1n3f]], [[1t9i|1t9i]], [[1u0d|1u0d]], [[1t9j|1t9j]], [[1n3e|1n3e]], [[1u0c|1u0c]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vbj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vbj RCSB], [http://www.ebi.ac.uk/pdbsum/2vbj PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vbj OCA], [https://pdbe.org/2vbj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vbj RCSB], [https://www.ebi.ac.uk/pdbsum/2vbj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vbj ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DNE1_CHLRE DNE1_CHLRE]] Endonuclease involved in group I intron homing. Recognizes and cleaves a 19-24 bp palindromic DNA site.
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[https://www.uniprot.org/uniprot/DNE1_CHLRE DNE1_CHLRE] Endonuclease involved in group I intron homing. Recognizes and cleaves a 19-24 bp palindromic DNA site.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/2vbj_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/2vbj_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vbj ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 2vbj" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
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*[[Endonuclease|Endonuclease]]
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*[[Endonuclease 3D structures|Endonuclease 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Chlamydomonas reinhardtii]]
[[Category: Chlamydomonas reinhardtii]]
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[[Category: Alibes, A]]
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[[Category: Large Structures]]
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[[Category: Arnould, S]]
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[[Category: Synthetic construct]]
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[[Category: Blanco, F J]]
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[[Category: Alibes A]]
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[[Category: Cabaniols, J P]]
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[[Category: Arnould S]]
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[[Category: Duchateau, P]]
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[[Category: Blanco FJ]]
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[[Category: Montoya, G]]
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[[Category: Cabaniols JP]]
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[[Category: Munoz, I G]]
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[[Category: Duchateau P]]
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[[Category: Paques, F]]
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[[Category: Montoya G]]
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[[Category: Perez, C]]
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[[Category: Munoz IG]]
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[[Category: Prieto, J]]
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[[Category: Paques F]]
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[[Category: Redondo, P]]
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[[Category: Perez C]]
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[[Category: Serrano, L]]
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[[Category: Prieto J]]
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[[Category: Stricher, F]]
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[[Category: Redondo P]]
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[[Category: Amel3-4-calcium]]
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[[Category: Serrano L]]
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[[Category: Cutting dna endonuclease]]
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[[Category: Stricher F]]
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[[Category: Hydrolase-dna complex]]
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[[Category: Uv-induced dna damage]]
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Current revision

Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers

PDB ID 2vbj

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