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2k3v
From Proteopedia
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==Solution Structure of a Tetrahaem Cytochrome from Shewanella Frigidimarina== | ==Solution Structure of a Tetrahaem Cytochrome from Shewanella Frigidimarina== | ||
| - | <StructureSection load='2k3v' size='340' side='right' caption='[[2k3v]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2k3v' size='340' side='right'caption='[[2k3v]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2k3v]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2k3v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shefn Shefn]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K3V FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand= | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cctA, Sfri_1504 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cctA, Sfri_1504 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=318167 SHEFN])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k3v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k3v OCA], [https://pdbe.org/2k3v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k3v RCSB], [https://www.ebi.ac.uk/pdbsum/2k3v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k3v ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/CYC3_SHEFN CYC3_SHEFN]] Transfers electrons to ferredoxin III. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/2k3v_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/2k3v_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k3v ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2k3v" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Cytochrome | + | *[[Cytochrome C 3D structures|Cytochrome C 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| + | [[Category: Shefn]] | ||
[[Category: Brennan, L]] | [[Category: Brennan, L]] | ||
[[Category: Chapman, S K]] | [[Category: Chapman, S K]] | ||
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[[Category: Metal-binding]] | [[Category: Metal-binding]] | ||
[[Category: Multihaem cytochrome]] | [[Category: Multihaem cytochrome]] | ||
| + | [[Category: Periplasm]] | ||
[[Category: Redox protein]] | [[Category: Redox protein]] | ||
[[Category: Shewanella]] | [[Category: Shewanella]] | ||
[[Category: Transport]] | [[Category: Transport]] | ||
Current revision
Solution Structure of a Tetrahaem Cytochrome from Shewanella Frigidimarina
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Categories: Large Structures | Shefn | Brennan, L | Chapman, S K | Paixao, V B | Reid, G A | Salgueiro, C A | Turner, D L | Electron transport | Heme | Iron | Metal-binding | Multihaem cytochrome | Periplasm | Redox protein | Shewanella | Transport
