2b3z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:42, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2b3z.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis==
-
|PDB= 2b3z |SIZE=350|CAPTION= <scene name='initialview01'>2b3z</scene>, resolution 2.410&Aring;
+
<StructureSection load='2b3z' size='340' side='right'caption='[[2b3z]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=ZN:ZINC ION'>ZN</scene>
+
<table><tr><td colspan='2'>[[2b3z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B3Z FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.41&#8491;</td></tr>
-
|GENE= RibG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b3z OCA], [https://pdbe.org/2b3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b3z RCSB], [https://www.ebi.ac.uk/pdbsum/2b3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b3z ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/RIBD_BACSU RIBD_BACSU] Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2B3Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B3Z OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b3/2b3z_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b3z ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Chang, Y C.]]
+
[[Category: Chang YC]]
-
[[Category: Chen, S J.]]
+
[[Category: Chen SJ]]
-
[[Category: Liaw, S H.]]
+
[[Category: Liaw SH]]
-
[[Category: ZN]]
+
-
[[Category: alpha/beta/alpha]]
+
-
[[Category: deaminase domain and reductase domain]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:57:15 2008''
+

Current revision

Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis

PDB ID 2b3z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools