2bdv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:52, 30 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2bdv.jpg|left|200px]]
 
-
{{Structure
+
==X-Ray Crystal Structure of Phage-related Protein BB2244 from Bordetella bronchiseptica. Northeast Structural Genomics Consortium Target BoR24.==
-
|PDB= 2bdv |SIZE=350|CAPTION= <scene name='initialview01'>2bdv</scene>, resolution 2.20&Aring;
+
<StructureSection load='2bdv' size='340' side='right'caption='[[2bdv]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2bdv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_bronchiseptica_RB50 Bordetella bronchiseptica RB50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BDV FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
|GENE= 2660008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=518 Bordetella bronchiseptica])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bdv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bdv OCA], [https://pdbe.org/2bdv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bdv RCSB], [https://www.ebi.ac.uk/pdbsum/2bdv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bdv ProSAT], [https://www.topsan.org/Proteins/NESGC/2bdv TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''X-Ray Crystal Structure of Phage-related Protein BB2244 from Bordetella bronchiseptica. Northeast Structural Genomics Consortium Target BoR24.'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A0A0H3LUS8_BORBR A0A0H3LUS8_BORBR]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2BDV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica Bordetella bronchiseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDV OCA].
+
Check<jmol>
-
[[Category: Bordetella bronchiseptica]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/2bdv_consurf.spt"</scriptWhenChecked>
-
[[Category: Abashidze, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Acton, T B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Benach, J.]]
+
</jmolCheckbox>
-
[[Category: Cooper, B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bdv ConSurf].
-
[[Category: Forouhar, F.]]
+
<div style="clear:both"></div>
-
[[Category: Hunt, J F.]]
+
__TOC__
-
[[Category: Janjua, H.]]
+
</StructureSection>
-
[[Category: Jayaraman, S.]]
+
[[Category: Bordetella bronchiseptica RB50]]
-
[[Category: Montelione, G T.]]
+
[[Category: Large Structures]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Abashidze M]]
-
[[Category: Tong, L.]]
+
[[Category: Acton TB]]
-
[[Category: Xiao, R.]]
+
[[Category: Benach J]]
-
[[Category: alpha-beta protein]]
+
[[Category: Cooper B]]
-
[[Category: nesg]]
+
[[Category: Forouhar F]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Hunt JF]]
-
[[Category: protein structure initiative]]
+
[[Category: Janjua H]]
-
[[Category: psi]]
+
[[Category: Jayaraman S]]
-
[[Category: structural genomic]]
+
[[Category: Montelione GT]]
-
 
+
[[Category: Tong L]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:00:39 2008''
+
[[Category: Xiao R]]

Current revision

X-Ray Crystal Structure of Phage-related Protein BB2244 from Bordetella bronchiseptica. Northeast Structural Genomics Consortium Target BoR24.

PDB ID 2bdv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2bdv"
Personal tools