This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4btq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:05, 9 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206==
==Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206==
-
<StructureSection load='4btq' size='340' side='right' caption='[[4btq]], [[Resolution|resolution]] 7.50&Aring;' scene=''>
+
<SX load='4btq' size='340' side='right' viewer='molstar' caption='[[4btq]], [[Resolution|resolution]] 7.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4btq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpph6 Bpph6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BTQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BTQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4btq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_virus_phi6 Pseudomonas virus phi6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BTQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BTQ FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4btg|4btg]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 7.5&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4btq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4btq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4btq RCSB], [http://www.ebi.ac.uk/pdbsum/4btq PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4btq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4btq OCA], [https://pdbe.org/4btq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4btq RCSB], [https://www.ebi.ac.uk/pdbsum/4btq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4btq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/P1_BPPH6 P1_BPPH6]] P1 is the major inner capsid (core) protein of the polyhedral procapsid, which is responsible for genomic replication and transcription. Forms a dodecahedral shell from 60 asymmetric dimers. Binds to RNA and may be involved in genomic packaging.
+
[https://www.uniprot.org/uniprot/P1_BPPH6 P1_BPPH6] P1 is the major inner capsid (core) protein of the polyhedral procapsid, which is responsible for genomic replication and transcription. Forms a dodecahedral shell from 60 asymmetric dimers. Binds to RNA and may be involved in genomic packaging.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4btq" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
-
</StructureSection>
+
</SX>
-
[[Category: Bpph6]]
+
[[Category: Large Structures]]
-
[[Category: Boura, E]]
+
[[Category: Pseudomonas virus phi6]]
-
[[Category: Cheng, N]]
+
[[Category: Boura E]]
-
[[Category: Heymann, J B]]
+
[[Category: Cheng N]]
-
[[Category: Hurley, J H]]
+
[[Category: Heymann JB]]
-
[[Category: Mindich, L]]
+
[[Category: Hurley JH]]
-
[[Category: Nemecek, D]]
+
[[Category: Mindich L]]
-
[[Category: Plevka, P]]
+
[[Category: Nemecek D]]
-
[[Category: Qiao, J]]
+
[[Category: Plevka P]]
-
[[Category: Steven, A C]]
+
[[Category: Qiao J]]
-
[[Category: Wu, W]]
+
[[Category: Steven AC]]
-
[[Category: Cystoviridae]]
+
[[Category: Wu W]]
-
[[Category: Flexible fitting]]
+
-
[[Category: Procapsid structure]]
+
-
[[Category: Viral protein]]
+

Current revision

Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206

4btq, resolution 7.50Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools