4pzi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:43, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Zinc finger region of MLL2 in complex with CpG DNA==
==Zinc finger region of MLL2 in complex with CpG DNA==
-
<StructureSection load='4pzi' size='340' side='right' caption='[[4pzi]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='4pzi' size='340' side='right'caption='[[4pzi]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4pzi]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PZI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4pzi]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PZI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histone-lysine_N-methyltransferase Histone-lysine N-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.43 2.1.1.43] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pzi RCSB], [http://www.ebi.ac.uk/pdbsum/4pzi PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzi OCA], [https://pdbe.org/4pzi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pzi RCSB], [https://www.ebi.ac.uk/pdbsum/4pzi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzi ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/KMT2B_HUMAN KMT2B_HUMAN]] Histone methyltransferase. Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Plays a central role in beta-globin locus transcription regulation by being recruited by NFE2. Plays an important role in controlling bulk H3K4me during oocyte growth and preimplantation development. Required during the transcriptionally active period of oocyte growth for the establishment and/or maintenance of bulk H3K4 trimethylation (H3K4me3), global transcriptional silencing that preceeds resumption of meiosis, oocyte survival and normal zygotic genome activation.<ref>PMID:17707229</ref>
+
[https://www.uniprot.org/uniprot/KMT2B_HUMAN KMT2B_HUMAN] Histone methyltransferase. Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Plays a central role in beta-globin locus transcription regulation by being recruited by NFE2. Plays an important role in controlling bulk H3K4me during oocyte growth and preimplantation development. Required during the transcriptionally active period of oocyte growth for the establishment and/or maintenance of bulk H3K4 trimethylation (H3K4me3), global transcriptional silencing that preceeds resumption of meiosis, oocyte survival and normal zygotic genome activation.<ref>PMID:17707229</ref>
==See Also==
==See Also==
-
*[[Histone methyltransferase|Histone methyltransferase]]
+
*[[Histone methyltransferase 3D structures|Histone methyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Histone-lysine N-methyltransferase]]
+
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Large Structures]]
-
[[Category: Bountra, C]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Chao, X]]
+
[[Category: Bountra C]]
-
[[Category: Dong, A]]
+
[[Category: Chao X]]
-
[[Category: Edwards, A M]]
+
[[Category: Dong A]]
-
[[Category: Liu, K]]
+
[[Category: Edwards AM]]
-
[[Category: Min, J]]
+
[[Category: Liu K]]
-
[[Category: Structural genomic]]
+
[[Category: Min J]]
-
[[Category: Tempel, W]]
+
[[Category: Tempel W]]
-
[[Category: Weigelt, J]]
+
[[Category: Weigelt J]]
-
[[Category: Dna-binding]]
+
-
[[Category: Sgc]]
+
-
[[Category: Transcription-dna complex]]
+
-
[[Category: Zinc finger]]
+

Current revision

Zinc finger region of MLL2 in complex with CpG DNA

PDB ID 4pzi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4pzi"
Personal tools