3p4u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:20, 21 February 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of active caspase-6 in complex with Ac-VEID-CHO inhibitor==
==Crystal structure of active caspase-6 in complex with Ac-VEID-CHO inhibitor==
-
<StructureSection load='3p4u' size='340' side='right' caption='[[3p4u]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='3p4u' size='340' side='right'caption='[[3p4u]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3p4u]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3P4U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3p4u]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P4U FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ASJ:(3S)-3-AMINO-4-HYDROXYBUTANOIC+ACID'>ASJ</scene>, <scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3p45|3p45]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ASJ:(3S)-3-AMINO-4-HYDROXYBUTANOIC+ACID'>ASJ</scene>, <scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CASP6, MCH2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p4u OCA], [https://pdbe.org/3p4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p4u RCSB], [https://www.ebi.ac.uk/pdbsum/3p4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p4u ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Caspase-6 Caspase-6], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.59 3.4.22.59] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3p4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3p4u RCSB], [http://www.ebi.ac.uk/pdbsum/3p4u PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CASP6_HUMAN CASP6_HUMAN]] Involved in the activation cascade of caspases responsible for apoptosis execution. Cleaves poly(ADP-ribose) polymerase in vitro, as well as lamins. Overexpression promotes programmed cell death.
+
[https://www.uniprot.org/uniprot/CASP6_HUMAN CASP6_HUMAN] Involved in the activation cascade of caspases responsible for apoptosis execution. Cleaves poly(ADP-ribose) polymerase in vitro, as well as lamins. Overexpression promotes programmed cell death.
==See Also==
==See Also==
-
*[[Caspase|Caspase]]
+
*[[Caspase 3D structures|Caspase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Caspase-6]]
 
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Dominguez, C]]
+
[[Category: Large Structures]]
-
[[Category: Kiselyov, A]]
+
[[Category: Dominguez C]]
-
[[Category: Lamers, M B.A C]]
+
[[Category: Kiselyov A]]
-
[[Category: Maillard, M]]
+
[[Category: Lamers MBAC]]
-
[[Category: Mueller, I]]
+
[[Category: Maillard M]]
-
[[Category: Munoz, I]]
+
[[Category: Mueller I]]
-
[[Category: Ritchie, A J]]
+
[[Category: Munoz I]]
-
[[Category: Caspase]]
+
[[Category: Ritchie AJ]]
-
[[Category: Competitive inhibition]]
+
-
[[Category: Huntington's disease]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Protease]]
+

Current revision

Crystal structure of active caspase-6 in complex with Ac-VEID-CHO inhibitor

PDB ID 3p4u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools