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1wwr
From Proteopedia
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==Crystal structure of tRNA adenosine deaminase TadA from Aquifex aeolicus== | ==Crystal structure of tRNA adenosine deaminase TadA from Aquifex aeolicus== | ||
| - | <StructureSection load='1wwr' size='340' side='right' caption='[[1wwr]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='1wwr' size='340' side='right'caption='[[1wwr]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1wwr]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1wwr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WWR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WWR FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wwr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wwr OCA], [https://pdbe.org/1wwr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wwr RCSB], [https://www.ebi.ac.uk/pdbsum/1wwr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wwr ProSAT], [https://www.topsan.org/Proteins/RSGI/1wwr TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/TADA_AQUAE TADA_AQUAE] Deaminates adenosine-34 to inosine in tRNA-Arg2. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/1wwr_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/1wwr_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wwr ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 1wwr" style="background-color:#fffaf0;"></div> | ||
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| + | ==See Also== | ||
| + | *[[Adenosine deaminase 3D structures|Adenosine deaminase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Aquifex aeolicus]] | [[Category: Aquifex aeolicus]] | ||
| - | [[Category: Bessho | + | [[Category: Large Structures]] |
| - | [[Category: Fukunaga | + | [[Category: Bessho Y]] |
| - | [[Category: Ishii | + | [[Category: Fukunaga R]] |
| - | [[Category: Kuratani | + | [[Category: Ishii R]] |
| - | + | [[Category: Kuratani M]] | |
| - | [[Category: Sekine | + | [[Category: Sekine S]] |
| - | [[Category: Sengoku | + | [[Category: Sengoku T]] |
| - | [[Category: Yokoyama | + | [[Category: Yokoyama S]] |
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Current revision
Crystal structure of tRNA adenosine deaminase TadA from Aquifex aeolicus
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Categories: Aquifex aeolicus | Large Structures | Bessho Y | Fukunaga R | Ishii R | Kuratani M | Sekine S | Sengoku T | Yokoyama S
