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4ihs

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==Crystal Structure of BenM_DBD/catB site 1 DNA Complex==
==Crystal Structure of BenM_DBD/catB site 1 DNA Complex==
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<StructureSection load='4ihs' size='340' side='right' caption='[[4ihs]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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<StructureSection load='4ihs' size='340' side='right'caption='[[4ihs]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4ihs]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aciad Aciad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IHS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IHS FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4ihs]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IHS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IHS FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3m1e|3m1e]], [[4iht|4iht]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ACIAD1435, benM, benR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=62977 ACIAD])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ihs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ihs OCA], [https://pdbe.org/4ihs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ihs RCSB], [https://www.ebi.ac.uk/pdbsum/4ihs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ihs ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ihs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ihs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ihs RCSB], [http://www.ebi.ac.uk/pdbsum/4ihs PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/BENM_ACIAD BENM_ACIAD]] Positive regulator of the ben and cat genes for benzoate degradation. BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM. Binds to the inducers cis,cis-muconate and benzoate.
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[https://www.uniprot.org/uniprot/BENM_ACIAD BENM_ACIAD] Positive regulator of the ben and cat genes for benzoate degradation. BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM. Binds to the inducers cis,cis-muconate and benzoate.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 4ihs" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aciad]]
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[[Category: Acinetobacter baylyi ADP1]]
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[[Category: Alanazi, A]]
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[[Category: Large Structures]]
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[[Category: Momany, C]]
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[[Category: Alanazi A]]
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[[Category: Neidle, E L]]
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[[Category: Momany C]]
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[[Category: Catb promoter]]
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[[Category: Neidle EL]]
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[[Category: Hth]]
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[[Category: Transcription-dna complex]]
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[[Category: Transcriptional regulator]]
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[[Category: Whth]]
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Current revision

Crystal Structure of BenM_DBD/catB site 1 DNA Complex

PDB ID 4ihs

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