3udp

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==Crystal Structure of BACE with Compound 12==
==Crystal Structure of BACE with Compound 12==
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<StructureSection load='3udp' size='340' side='right' caption='[[3udp]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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<StructureSection load='3udp' size='340' side='right'caption='[[3udp]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3udp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UDP FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3udp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UDP FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=09D:(4S)-6-BROMO-3,4-DIHYDRO-2H-THIOCHROMEN-4-YL+(3S,5R)-2-OXO-1,2-DIHYDROSPIRO[INDOLE-3,3-PYRROLIDINE]-5-CARBOXYLATE'>09D</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3udh|3udh]], [[3udj|3udj]], [[3udk|3udk]], [[3udm|3udm]], [[3udn|3udn]], [[3udq|3udq]], [[3udr|3udr]], [[3udy|3udy]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=09D:(4S)-6-BROMO-3,4-DIHYDRO-2H-THIOCHROMEN-4-YL+(3S,5R)-2-OXO-1,2-DIHYDROSPIRO[INDOLE-3,3-PYRROLIDINE]-5-CARBOXYLATE'>09D</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BACE1, BACE, KIAA1149 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3udp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udp OCA], [https://pdbe.org/3udp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3udp RCSB], [https://www.ebi.ac.uk/pdbsum/3udp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3udp ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3udp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3udp RCSB], [http://www.ebi.ac.uk/pdbsum/3udp PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/BACE1_HUMAN BACE1_HUMAN]] Responsible for the proteolytic processing of the amyloid precursor protein (APP). Cleaves at the N-terminus of the A-beta peptide sequence, between residues 671 and 672 of APP, leads to the generation and extracellular release of beta-cleaved soluble APP, and a corresponding cell-associated C-terminal fragment which is later released by gamma-secretase.<ref>PMID:10677483</ref> <ref>PMID:20354142</ref>
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[https://www.uniprot.org/uniprot/BACE1_HUMAN BACE1_HUMAN] Responsible for the proteolytic processing of the amyloid precursor protein (APP). Cleaves at the N-terminus of the A-beta peptide sequence, between residues 671 and 672 of APP, leads to the generation and extracellular release of beta-cleaved soluble APP, and a corresponding cell-associated C-terminal fragment which is later released by gamma-secretase.<ref>PMID:10677483</ref> <ref>PMID:20354142</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3udp" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
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*[[Beta secretase|Beta secretase]]
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*[[Beta secretase 3D structures|Beta secretase 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Memapsin 2]]
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[[Category: Large Structures]]
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[[Category: Borzilleri, K]]
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[[Category: Borzilleri K]]
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[[Category: Capetta, S]]
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[[Category: Capetta S]]
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[[Category: Connell, T O]]
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[[Category: Dorff P]]
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[[Category: Dorff, P]]
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[[Category: Dutra J]]
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[[Category: Dutra, J]]
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[[Category: Efremov IV]]
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[[Category: Efremov, I V]]
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[[Category: Mansour M]]
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[[Category: Mansour, M]]
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[[Category: O'Connell T]]
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[[Category: Oborski, C]]
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[[Category: O'Sullivan TJ]]
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[[Category: Pandit, J]]
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[[Category: Oborski C]]
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[[Category: Sullivan, T J.O]]
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[[Category: Pandit J]]
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[[Category: Vajdos, F F]]
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[[Category: Vajdos FF]]
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[[Category: Wang, H]]
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[[Category: Wang H]]
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[[Category: Withka, J]]
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[[Category: Withka J]]
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[[Category: Hydrolase-hydrolase inhibitor complex]]
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Current revision

Crystal Structure of BACE with Compound 12

PDB ID 3udp

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