1mr4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:31, 23 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution Structure of NaD1 from Nicotiana alata==
==Solution Structure of NaD1 from Nicotiana alata==
-
<StructureSection load='1mr4' size='340' side='right' caption='[[1mr4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='1mr4' size='340' side='right'caption='[[1mr4]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1mr4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MR4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1MR4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1mr4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MR4 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mr4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1mr4 RCSB], [http://www.ebi.ac.uk/pdbsum/1mr4 PDBsum]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mr4 OCA], [https://pdbe.org/1mr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mr4 RCSB], [https://www.ebi.ac.uk/pdbsum/1mr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mr4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DEF_TOBAC DEF_TOBAC]] Involved in floral organogenesis. May play a protective role in flowers by protecting the reproductive organs from potential pathogen attack.
+
[https://www.uniprot.org/uniprot/DEF_TOBAC DEF_TOBAC] Involved in floral organogenesis. May play a protective role in flowers by protecting the reproductive organs from potential pathogen attack.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mr/1mr4_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mr/1mr4_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mr4 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1mr4" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Defensin|Defensin]]
+
*[[Defensin 3D structures|Defensin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Nicotiana tabacum]]
[[Category: Nicotiana tabacum]]
-
[[Category: Anderson, M A]]
+
[[Category: Anderson MA]]
-
[[Category: Craik, D J]]
+
[[Category: Craik DJ]]
-
[[Category: Lay, F T]]
+
[[Category: Lay FT]]
-
[[Category: Scanlon, M J]]
+
[[Category: Scanlon MJ]]
-
[[Category: Schirra, H J]]
+
[[Category: Schirra HJ]]
-
[[Category: Cysteine-stabilized alpha-beta motif]]
+
-
[[Category: Plant defensin fold]]
+
-
[[Category: Plant protein]]
+

Current revision

Solution Structure of NaD1 from Nicotiana alata

PDB ID 1mr4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1mr4"
Personal tools