3a59

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:11, 1 November 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of Hemoglobin from flightless bird (Struthio camelus)==
==Structure of Hemoglobin from flightless bird (Struthio camelus)==
-
<StructureSection load='3a59' size='340' side='right' caption='[[3a59]], [[Resolution|resolution]] 3.41&Aring;' scene=''>
+
<StructureSection load='3a59' size='340' side='right'caption='[[3a59]], [[Resolution|resolution]] 3.41&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3a59]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Struthio_camelus Struthio camelus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A59 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A59 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3a59]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Struthio_camelus Struthio camelus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A59 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A59 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.41&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3fs4|3fs4]], [[1faw|1faw]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a59 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3a59 RCSB], [http://www.ebi.ac.uk/pdbsum/3a59 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a59 OCA], [https://pdbe.org/3a59 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a59 RCSB], [https://www.ebi.ac.uk/pdbsum/3a59 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a59 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HBA_STRCA HBA_STRCA]] Involved in oxygen transport from the lung to the various peripheral tissues. [[http://www.uniprot.org/uniprot/HBB_STRCA HBB_STRCA]] Involved in oxygen transport from the lung to the various peripheral tissues.
+
[https://www.uniprot.org/uniprot/HBA_STRCA HBA_STRCA] Involved in oxygen transport from the lung to the various peripheral tissues.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/3a59_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/3a59_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a59 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
Line 24: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Struthio camelus]]
[[Category: Struthio camelus]]
-
[[Category: Jaimohan, S M]]
+
[[Category: Jaimohan SM]]
-
[[Category: Mandal, A B]]
+
[[Category: Mandal AB]]
-
[[Category: Naresh, M D]]
+
[[Category: Naresh MD]]
-
[[Category: Heme]]
+
-
[[Category: Hemoglobin]]
+
-
[[Category: Iron]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Ostrich]]
+
-
[[Category: Oxygen storage]]
+
-
[[Category: Oxygen transport]]
+
-
[[Category: Transport]]
+

Current revision

Structure of Hemoglobin from flightless bird (Struthio camelus)

PDB ID 3a59

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools