2czp

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[[Image:2czp.gif|left|200px]]
 
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{{Structure
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==Structural analysis of membrane-bound mastoparan-X by solid-state NMR==
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|PDB= 2czp |SIZE=350|CAPTION= <scene name='initialview01'>2czp</scene>
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<StructureSection load='2czp' size='340' side='right'caption='[[2czp]]' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=NH2:AMINO GROUP'>NH2</scene>
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<table><tr><td colspan='2'>[[2czp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vespa_simillima_xanthoptera Vespa simillima xanthoptera]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZP FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solid-state NMR</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2czp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2czp OCA], [https://pdbe.org/2czp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2czp RCSB], [https://www.ebi.ac.uk/pdbsum/2czp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2czp ProSAT]</span></td></tr>
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</table>
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'''Structural analysis of membrane-bound mastoparan-X by solid-state NMR'''
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== Function ==
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[https://www.uniprot.org/uniprot/MAST_VESXA MAST_VESXA] Mast cell degranulating peptide. Activates G proteins that couple to phospholipase C.
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<div style="background-color:#fffaf0;">
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==Overview==
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== Publication Abstract from PubMed ==
The structure of mastoparan-X (MP-X), a G-protein activating peptide from wasp venom, in the state tightly bound to anionic phospholipid bilayers was determined by solid-state NMR spectroscopy. Carbon-13 and nitrogen-15 NMR signals of uniformly labeled MP-X were completely assigned by multidimensional intraresidue C-C, N-CalphaCbeta, and N-Calpha-C', and interresidue Calpha-CalphaCbeta, N-CalphaCbeta, and N-C'-Calpha correlation experiments. The backbone torsion angles were predicted from the chemical shifts of 13C', 13Calpha, 13Cbeta, and 15N signals with the aid of protein NMR database programs. In addition, two 13C-13C and three 13C-15N distances between backbone nuclei were precisely measured by rotational resonance and REDOR experiments, respectively. The backbone structure of MP-X was determined from the 26 dihedral angle restraints and five distances with an average root-mean-square deviation of 0.6 A. Peptide MP-X in the bilayer-bound state formed an amphiphilic alpha-helix for residues Trp3-Leu14 and adopted an extended conformation for Asn2. This membrane-bound conformation is discussed in relation to the peptide's activities to form pores in membranes and to activate G-proteins. This study demonstrates the power of multidimensional solid-state NMR of uniformly isotope-labeled molecules and distance measurements for determining the structures of peptides bound to lipid membranes.
The structure of mastoparan-X (MP-X), a G-protein activating peptide from wasp venom, in the state tightly bound to anionic phospholipid bilayers was determined by solid-state NMR spectroscopy. Carbon-13 and nitrogen-15 NMR signals of uniformly labeled MP-X were completely assigned by multidimensional intraresidue C-C, N-CalphaCbeta, and N-Calpha-C', and interresidue Calpha-CalphaCbeta, N-CalphaCbeta, and N-C'-Calpha correlation experiments. The backbone torsion angles were predicted from the chemical shifts of 13C', 13Calpha, 13Cbeta, and 15N signals with the aid of protein NMR database programs. In addition, two 13C-13C and three 13C-15N distances between backbone nuclei were precisely measured by rotational resonance and REDOR experiments, respectively. The backbone structure of MP-X was determined from the 26 dihedral angle restraints and five distances with an average root-mean-square deviation of 0.6 A. Peptide MP-X in the bilayer-bound state formed an amphiphilic alpha-helix for residues Trp3-Leu14 and adopted an extended conformation for Asn2. This membrane-bound conformation is discussed in relation to the peptide's activities to form pores in membranes and to activate G-proteins. This study demonstrates the power of multidimensional solid-state NMR of uniformly isotope-labeled molecules and distance measurements for determining the structures of peptides bound to lipid membranes.
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==About this Structure==
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Structure of tightly membrane-bound mastoparan-X, a G-protein-activating peptide, determined by solid-state NMR.,Todokoro Y, Yumen I, Fukushima K, Kang SW, Park JS, Kohno T, Wakamatsu K, Akutsu H, Fujiwara T Biophys J. 2006 Aug 15;91(4):1368-79. Epub 2006 May 19. PMID:16714348<ref>PMID:16714348</ref>
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2CZP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vespa_simillima_xanthoptera Vespa simillima xanthoptera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZP OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Structure of tightly membrane-bound mastoparan-X, a G-protein-activating peptide, determined by solid-state NMR., Todokoro Y, Yumen I, Fukushima K, Kang SW, Park JS, Kohno T, Wakamatsu K, Akutsu H, Fujiwara T, Biophys J. 2006 Aug 15;91(4):1368-79. Epub 2006 May 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16714348 16714348]
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</div>
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[[Category: Single protein]]
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<div class="pdbe-citations 2czp" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Vespa simillima xanthoptera]]
[[Category: Vespa simillima xanthoptera]]
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[[Category: Akutsu, H.]]
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[[Category: Akutsu H]]
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[[Category: Fujiwara, T.]]
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[[Category: Fujiwara T]]
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[[Category: Fukushima, K.]]
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[[Category: Fukushima K]]
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[[Category: Kang, S W.]]
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[[Category: Kang S-W]]
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[[Category: Kohno, T.]]
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[[Category: Kohno T]]
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[[Category: Park, J S.]]
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[[Category: Park J-S]]
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[[Category: Todokoro, Y.]]
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[[Category: Todokoro Y]]
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[[Category: Wakamatsu, K.]]
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[[Category: Wakamatsu K]]
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[[Category: Yumen, I.]]
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[[Category: Yumen I]]
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[[Category: NH2]]
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[[Category: 3d-structure]]
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[[Category: amidation]]
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[[Category: mast cell degranulation]]
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[[Category: mastoparan x]]
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[[Category: membrane bound]]
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[[Category: mp-x]]
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[[Category: venom]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:21:36 2008''
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Current revision

Structural analysis of membrane-bound mastoparan-X by solid-state NMR

PDB ID 2czp

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