2d54

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[[Image:2d54.jpg|left|200px]]
 
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{{Structure
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==Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus==
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|PDB= 2d54 |SIZE=350|CAPTION= <scene name='initialview01'>2d54</scene>, resolution 2.0&Aring;
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<StructureSection load='2d54' size='340' side='right'caption='[[2d54]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=ZN:ZINC ION'>ZN</scene>
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<table><tr><td colspan='2'>[[2d54]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D54 FirstGlance]. <br>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Methionine--tRNA_ligase Methionine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.10 6.1.1.10]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d54 OCA], [https://pdbe.org/2d54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d54 RCSB], [https://www.ebi.ac.uk/pdbsum/2d54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d54 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d54 TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SYM_THET8 SYM_THET8] Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/2d54_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d54 ConSurf].
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<div style="clear:both"></div>
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'''Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus'''
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==See Also==
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*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2D54 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D54 OCA].
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[[Category: Large Structures]]
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[[Category: Methionine--tRNA ligase]]
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[[Category: Single protein]]
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[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
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[[Category: Ishii, R.]]
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[[Category: Ishii R]]
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[[Category: Konno, M.]]
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[[Category: Konno M]]
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[[Category: Mori, Y.]]
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[[Category: Mori Y]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Takasaka R]]
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[[Category: Takasaka, R.]]
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[[Category: Takeda R]]
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[[Category: Takeda, R.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: ZN]]
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[[Category: class 1a aar]]
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[[Category: isomerase]]
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[[Category: national project on protein structural and functional analyse]]
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[[Category: nppsfa]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: rossmann fold]]
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[[Category: rsgi]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:23:24 2008''
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Current revision

Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus

PDB ID 2d54

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