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| ==Solution structure of Ani s 5 Anisakis simplex allergen== | | ==Solution structure of Ani s 5 Anisakis simplex allergen== |
- | <StructureSection load='2mar' size='340' side='right' caption='[[2mar]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2mar' size='340' side='right'caption='[[2mar]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2mar]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MAR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2MAR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2mar]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Anisakis_simplex Anisakis simplex]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MAR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MAR FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2mar FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mar OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2mar RCSB], [http://www.ebi.ac.uk/pdbsum/2mar PDBsum]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mar FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mar OCA], [https://pdbe.org/2mar PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mar RCSB], [https://www.ebi.ac.uk/pdbsum/2mar PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mar ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/ANIS5_ANISI ANIS5_ANISI] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| </div> | | </div> |
| + | <div class="pdbe-citations 2mar" style="background-color:#fffaf0;"></div> |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bruix, M]] | + | [[Category: Anisakis simplex]] |
- | [[Category: Caballero, M L]] | + | [[Category: Large Structures]] |
- | [[Category: Garcia-Mayoral, M F]] | + | [[Category: Bruix M]] |
- | [[Category: Knaute, T]] | + | [[Category: Caballero ML]] |
- | [[Category: Perez-Pinar, T]] | + | [[Category: Garcia-Mayoral MF]] |
- | [[Category: Rodriguez-Perez, R]] | + | [[Category: Knaute T]] |
- | [[Category: Trevino, M A]] | + | [[Category: Perez-Pinar T]] |
- | [[Category: Umpierrez, A]] | + | [[Category: Rodriguez-Perez R]] |
- | [[Category: Unknown function]]
| + | [[Category: Trevino MA]] |
| + | [[Category: Umpierrez A]] |
| Structural highlights
Function
ANIS5_ANISI
Publication Abstract from PubMed
BACKGROUND: Anisakiasis is a re-emerging global disease caused by consumption of raw or lightly cooked fish contaminated with L3 Anisakis larvae. This zoonotic disease is characterized by severe gastrointestinal and/or allergic symptoms which may misdiagnosed as appendicitis, gastric ulcer or other food allergies. The Anisakis allergen Ani s 5 is a protein belonging to the SXP/RAL-2 family; it is detected exclusively in nematodes. Previous studies showed that SXP/RAL-2 proteins are active antigens; however, their structure and function remain unknown. The aim of this study was to elucidate the three-dimensional structure of Ani s 5 and its main IgE and IgG4 binding regions. METHODOLOGY/PRINCIPAL FINDINGS: The tertiary structure of recombinant Ani s 5 in solution was solved by nuclear magnetic resonance. Mg2+, but not Ca2+, binding was determined by band shift using SDS-PAGE. IgE and IgG4 epitopes were elucidated by microarray immunoassay and SPOTs membranes using sera from nine Anisakis allergic patients. The tertiary structure of Ani s 5 is composed of six alpha helices (H), with a Calmodulin like fold. H3 is a long, central helix that organizes the structure, with H1 and H2 packing at its N-terminus and H4 and H5 packing at its C-terminus. The orientation of H6 is undefined. Regarding epitopes recognized by IgE and IgG4 immunoglobulins, the same eleven peptides derived from Ani s 5 were bound by both IgE and IgG4. Peptides 14 (L40-K59), 26 (A76-A95) and 35 (I103-D122) were recognized by three out of nine sera. CONCLUSIONS/SIGNIFICANCE: This is the first reported 3D structure of an Anisakis allergen. Magnesium ion binding and structural resemblance to Calmodulin, suggest some putative functions for SXP/RAL-2 proteins. Furthermore, the IgE/IgG4 binding regions of Ani s 5 were identified as segments localized on its surface. These data will contribute towards a better understanding of the interactions that occur between immunoglobulins and allergens and, in turn, facilitate the design of novel diagnostic tests and immunotherapeutic strategies.
Relationships between IgE/IgG4 epitopes, structure and function in Anisakis simplex Ani s 5, a member of the SXP/RAL-2 protein family.,Garcia-Mayoral MF, Trevino MA, Perez-Pinar T, Caballero ML, Knaute T, Umpierrez A, Bruix M, Rodriguez-Perez R PLoS Negl Trop Dis. 2014 Mar 6;8(3):e2735. doi: 10.1371/journal.pntd.0002735., eCollection 2014 Mar. PMID:24603892[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Garcia-Mayoral MF, Trevino MA, Perez-Pinar T, Caballero ML, Knaute T, Umpierrez A, Bruix M, Rodriguez-Perez R. Relationships between IgE/IgG4 epitopes, structure and function in Anisakis simplex Ani s 5, a member of the SXP/RAL-2 protein family. PLoS Negl Trop Dis. 2014 Mar 6;8(3):e2735. doi: 10.1371/journal.pntd.0002735., eCollection 2014 Mar. PMID:24603892 doi:http://dx.doi.org/10.1371/journal.pntd.0002735
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