This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3aqx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:32, 1 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Bombyx mori beta-GRP/GNBP3 N-terminal domain with laminarihexaoses==
==Crystal structure of Bombyx mori beta-GRP/GNBP3 N-terminal domain with laminarihexaoses==
-
<StructureSection load='3aqx' size='340' side='right' caption='[[3aqx]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+
<StructureSection load='3aqx' size='340' side='right'caption='[[3aqx]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3aqx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AQX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3aqx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ie4|3ie4]], [[2rqe|2rqe]], [[2kha|2kha]], [[3aqy|3aqy]], [[3aqz|3aqz]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3aqx RCSB], [http://www.ebi.ac.uk/pdbsum/3aqx PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqx OCA], [https://pdbe.org/3aqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqx RCSB], [https://www.ebi.ac.uk/pdbsum/3aqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqx ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BGBP_BOMMO BGBP_BOMMO]] Involved in the recognition of invading micro-organisms. Binds specifically to beta-1,3-glucan and activates the phenoloxidase cascade.<ref>PMID:10671539</ref> <ref>PMID:3136171</ref>
+
[https://www.uniprot.org/uniprot/BGBP_BOMMO BGBP_BOMMO] Involved in the recognition of invading micro-organisms. Binds specifically to beta-1,3-glucan and activates the phenoloxidase cascade.<ref>PMID:10671539</ref> <ref>PMID:3136171</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3aqx" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Bombyx mori]]
[[Category: Bombyx mori]]
-
[[Category: Adachi, Y]]
+
[[Category: Large Structures]]
-
[[Category: Ikeda, A]]
+
[[Category: Adachi Y]]
-
[[Category: Kanagawa, M]]
+
[[Category: Ikeda A]]
-
[[Category: Ohno, N]]
+
[[Category: Kanagawa M]]
-
[[Category: Satoh, T]]
+
[[Category: Ohno N]]
-
[[Category: Yamaguchi, Y]]
+
[[Category: Satoh T]]
-
[[Category: 3-glucan]]
+
[[Category: Yamaguchi Y]]
-
[[Category: Beta-1]]
+
-
[[Category: Beta-sandwich]]
+
-
[[Category: Immune receptor]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Crystal structure of Bombyx mori beta-GRP/GNBP3 N-terminal domain with laminarihexaoses

PDB ID 3aqx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools