2ksc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:09, 27 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of Synechococcus sp. PCC 7002 hemoglobin==
==Solution structure of Synechococcus sp. PCC 7002 hemoglobin==
-
<StructureSection load='2ksc' size='340' side='right' caption='[[2ksc]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''>
+
<StructureSection load='2ksc' size='340' side='right'caption='[[2ksc]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ksc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechococcus_sp. Synechococcus sp.]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KSC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KSC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ksc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_sp._PCC_7002 Synechococcus sp. PCC 7002]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KSC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KSC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEB:HEME+B/C'>HEB</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 16 models</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glbN, SYNPCC7002_A1621 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1131 Synechococcus sp.])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ksc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ksc OCA], [https://pdbe.org/2ksc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ksc RCSB], [https://www.ebi.ac.uk/pdbsum/2ksc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ksc ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ksc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ksc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ksc RCSB], [http://www.ebi.ac.uk/pdbsum/2ksc PDBsum]</span></td></tr>
+
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 11: Line 11:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/2ksc_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/2ksc_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ksc ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 25:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2ksc" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Synechococcus sp]]
+
[[Category: Large Structures]]
-
[[Category: Falzone, C J]]
+
[[Category: Synechococcus sp. PCC 7002]]
-
[[Category: Lecomte, J T.J]]
+
[[Category: Falzone CJ]]
-
[[Category: Vuletich, D A]]
+
[[Category: Lecomte JTJ]]
-
[[Category: 2/2 hemoglobin]]
+
[[Category: Vuletich DA]]
-
[[Category: Glbn]]
+
-
[[Category: Hemeprotein]]
+
-
[[Category: Trhbn]]
+
-
[[Category: Unknown function]]
+

Current revision

Solution structure of Synechococcus sp. PCC 7002 hemoglobin

PDB ID 2ksc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools