This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4bf7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:49, 20 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Emericilla nidulans endo-beta-1,4-galactanase==
==Emericilla nidulans endo-beta-1,4-galactanase==
-
<StructureSection load='4bf7' size='340' side='right' caption='[[4bf7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='4bf7' size='340' side='right'caption='[[4bf7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4bf7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Emericella_nidulans Emericella nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BF7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BF7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4bf7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_nidulans Aspergillus nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BF7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BF7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.001&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Arabinogalactan_endo-beta-1,4-galactanase Arabinogalactan endo-beta-1,4-galactanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.89 3.2.1.89] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bf7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4bf7 RCSB], [http://www.ebi.ac.uk/pdbsum/4bf7 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bf7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bf7 OCA], [https://pdbe.org/4bf7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bf7 RCSB], [https://www.ebi.ac.uk/pdbsum/4bf7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bf7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GANA_EMENI GANA_EMENI]] Endogalactanase involved in the degradation of plant cell wall polysaccharides, and more particularly of hairy regions of pectin.
+
[https://www.uniprot.org/uniprot/GANA_EMENI GANA_EMENI] Endogalactanase involved in the degradation of plant cell wall polysaccharides, and more particularly of hairy regions of pectin.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4bf7" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Beta-1%2C4-galactanase|Beta-1%2C4-galactanase]]
 +
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arabinogalactan endo-beta-1,4-galactanase]]
+
[[Category: Aspergillus nidulans]]
-
[[Category: Emericella nidulans]]
+
[[Category: Large Structures]]
-
[[Category: Larsen, S]]
+
[[Category: Larsen S]]
-
[[Category: Michalak, M]]
+
[[Category: Michalak M]]
-
[[Category: Mikkelsen, J D]]
+
[[Category: Mikkelsen JD]]
-
[[Category: Otten, H]]
+
[[Category: Otten H]]
-
[[Category: Hydrolase]]
+

Current revision

Emericilla nidulans endo-beta-1,4-galactanase

PDB ID 4bf7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools