2f07

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:50, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2f07.jpg|left|200px]]
 
-
{{Structure
+
==Crystal Structure of YvdT from Bacillus subtilis==
-
|PDB= 2f07 |SIZE=350|CAPTION= <scene name='initialview01'>2f07</scene>, resolution 2.3&Aring;
+
<StructureSection load='2f07' size='340' side='right'caption='[[2f07]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>
+
<table><tr><td colspan='2'>[[2f07]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F07 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f07 OCA], [https://pdbe.org/2f07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f07 RCSB], [https://www.ebi.ac.uk/pdbsum/2f07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f07 ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Crystal Structure of YvdT from Bacillus subtilis'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YVDT_BACSU YVDT_BACSU]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2F07 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F07 OCA].
+
Check<jmol>
-
[[Category: Bacillus subtilis subsp. subtilis]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/2f07_consurf.spt"</scriptWhenChecked>
-
[[Category: Nan, J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Su, X D.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Yu, Y M.]]
+
</jmolCheckbox>
-
[[Category: BTB]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f07 ConSurf].
-
[[Category: helix-turn-helix]]
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:46:29 2008''
+
</StructureSection>
 +
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
 +
[[Category: Large Structures]]
 +
[[Category: Nan J]]
 +
[[Category: Su X-D]]
 +
[[Category: Yu Y-M]]

Current revision

Crystal Structure of YvdT from Bacillus subtilis

PDB ID 2f07

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2f07"
Personal tools