1km7
From Proteopedia
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==Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein== | ==Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein== | ||
| - | <StructureSection load='1km7' size='340' side='right' caption='[[1km7 | + | <StructureSection load='1km7' size='340' side='right'caption='[[1km7]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1km7]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1km7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KM7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KM7 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1km7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1km7 OCA], [https://pdbe.org/1km7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1km7 RCSB], [https://www.ebi.ac.uk/pdbsum/1km7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1km7 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/GBRAP_HUMAN GBRAP_HUMAN] May play a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis. Involved in autophagy (By similarity).<ref>PMID:15977068</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/1km7_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/1km7_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1km7 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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| + | ==See Also== | ||
| + | *[[GABA receptor-associated protein 3D structures|GABA receptor-associated protein 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Hirata | + | [[Category: Large Structures]] |
| - | [[Category: Kanematsu | + | [[Category: Hirata M]] |
| - | [[Category: Kawano | + | [[Category: Kanematsu T]] |
| - | [[Category: Kouno | + | [[Category: Kawano K]] |
| - | [[Category: Miura | + | [[Category: Kouno T]] |
| - | [[Category: Shirakawa | + | [[Category: Miura K]] |
| - | [[Category: Tada | + | [[Category: Shirakawa M]] |
| - | [[Category: Tate | + | [[Category: Tada M]] |
| - | + | [[Category: Tate S]] | |
| - | + | ||
Current revision
Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein
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Categories: Homo sapiens | Large Structures | Hirata M | Kanematsu T | Kawano K | Kouno T | Miura K | Shirakawa M | Tada M | Tate S
