This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3aa8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:16, 1 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli==
==Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli==
-
<StructureSection load='3aa8' size='340' side='right' caption='[[3aa8]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='3aa8' size='340' side='right'caption='[[3aa8]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3aa8]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AA8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3aa8]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AA8 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3aa9|3aa9]], [[3ah6|3ah6]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cutA1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aa8 OCA], [https://pdbe.org/3aa8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aa8 RCSB], [https://www.ebi.ac.uk/pdbsum/3aa8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aa8 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aa8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3aa8 RCSB], [http://www.ebi.ac.uk/pdbsum/3aa8 PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CUTA_ECOLI CUTA_ECOLI]] Involved in resistance toward heavy metals.<ref>PMID:7623666</ref>
+
[https://www.uniprot.org/uniprot/CUTA_ECOLI CUTA_ECOLI] Involved in resistance toward heavy metals.<ref>PMID:7623666</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aa/3aa8_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aa/3aa8_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3aa8 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 27: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3aa8" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[CutA1|CutA1]]
+
*[[CutA1 3D structures|CutA1 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Escherichia coli]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Bagautdinov, B]]
+
[[Category: Large Structures]]
-
[[Category: Kunishima, N]]
+
[[Category: Bagautdinov B]]
-
[[Category: Matsuura, Y]]
+
[[Category: Kunishima N]]
-
[[Category: Tanaka, T]]
+
[[Category: Matsuura Y]]
-
[[Category: Yutani, K]]
+
[[Category: Tanaka T]]
-
[[Category: Copper tolerance]]
+
[[Category: Yutani K]]
-
[[Category: Cuta1]]
+
-
[[Category: Point mutation]]
+
-
[[Category: Stability]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli

PDB ID 3aa8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools