3wan

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:01, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Atg13 LIR-fused human LC3A_2-121==
==Crystal structure of Atg13 LIR-fused human LC3A_2-121==
-
<StructureSection load='3wan' size='340' side='right' caption='[[3wan]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
+
<StructureSection load='3wan' size='340' side='right'caption='[[3wan]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3wan]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WAN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WAN FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3wan]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WAN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WAN FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.77&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vtu|3vtu]], [[3vtv|3vtv]], [[3vtw|3vtw]], [[3wal|3wal]], [[3wam|3wam]], [[3wao|3wao]], [[3wap|3wap]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MAP1LC3A ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wan FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wan OCA], [https://pdbe.org/3wan PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wan RCSB], [https://www.ebi.ac.uk/pdbsum/3wan PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wan ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wan FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wan OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wan RCSB], [http://www.ebi.ac.uk/pdbsum/3wan PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ATG13_HUMAN ATG13_HUMAN]] Autophagy factor required for autophagosome formation and mitophagy. Target of the TOR kinase signaling pathway that regulates autophagy through the control of the phosphorylation status of ATG13 and ULK1, and the regulation of the ATG13-ULK1-RB1CC1 complex. Through its regulation of ULK1 activity, plays a role in the regulation of the kinase activity of mTORC1 and cell proliferation.<ref>PMID:19287211</ref> <ref>PMID:19211835</ref> <ref>PMID:19225151</ref> <ref>PMID:21855797</ref> <ref>PMID:18936157</ref> <ref>PMID:21795849</ref>
+
[https://www.uniprot.org/uniprot/MLP3A_HUMAN MLP3A_HUMAN] Involved in formation of autophagosomal vacuoles (autophagosomes).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3wan" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Microtubule-associated protein 3D structures|Microtubule-associated protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Dobson, R C.J]]
+
[[Category: Large Structures]]
-
[[Category: Kato, R]]
+
[[Category: Dobson RCJ]]
-
[[Category: Kawasaki, M]]
+
[[Category: Kato R]]
-
[[Category: Morita, E]]
+
[[Category: Kawasaki M]]
-
[[Category: Suzuki, H]]
+
[[Category: Morita E]]
-
[[Category: Tabata, K]]
+
[[Category: Suzuki H]]
-
[[Category: Wakatsuki, S]]
+
[[Category: Tabata K]]
-
[[Category: Yoshimori, T]]
+
[[Category: Wakatsuki S]]
-
[[Category: Autophagy]]
+
[[Category: Yoshimori T]]
-
[[Category: Protein binding]]
+
-
[[Category: Ubiquitin-like fold]]
+

Current revision

Crystal structure of Atg13 LIR-fused human LC3A_2-121

PDB ID 3wan

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3wan"
Personal tools