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3d0w
From Proteopedia
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==Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326== | ==Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326== | ||
| - | <StructureSection load='3d0w' size='340' side='right' caption='[[3d0w]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='3d0w' size='340' side='right'caption='[[3d0w]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3d0w]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3d0w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0W FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yflH, BSU07680 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yflH, BSU07680 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0w OCA], [https://pdbe.org/3d0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0w RCSB], [https://www.ebi.ac.uk/pdbsum/3d0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0w ProSAT], [https://www.topsan.org/Proteins/NESGC/3d0w TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0w_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0w_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0w ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Vibrio subtilis ehrenberg 1835]] |
| + | [[Category: Large Structures]] | ||
[[Category: Acton, T B]] | [[Category: Acton, T B]] | ||
[[Category: Baran, M C]] | [[Category: Baran, M C]] | ||
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[[Category: Kuzin, A P]] | [[Category: Kuzin, A P]] | ||
[[Category: Liu, J]] | [[Category: Liu, J]] | ||
| - | [[Category: Ma, L | + | [[Category: Ma, L C]] |
[[Category: Min, S]] | [[Category: Min, S]] | ||
[[Category: Montelione, G T]] | [[Category: Montelione, G T]] | ||
Current revision
Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326
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Categories: Vibrio subtilis ehrenberg 1835 | Large Structures | Acton, T B | Baran, M C | Fang, Y | Forouhar, F | Hunt, J F | Kuzin, A P | Liu, J | Ma, L C | Min, S | Montelione, G T | Structural genomic | Neely, H | Owens, L | Rost, B | Seetharaman, J | Tong, L | Xiao, R | Zhao, L | Bacillus subtili | Gram-positive bacterium | Nesg | PSI, Protein structure initiative | Unknown function | Yflh
