This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4hth

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:10, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Staphylococcal nuclease variant Delta+VIAGLA at cryogenic temperature==
==Crystal structure of Staphylococcal nuclease variant Delta+VIAGLA at cryogenic temperature==
-
<StructureSection load='4hth' size='340' side='right' caption='[[4hth]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
+
<StructureSection load='4hth' size='340' side='right'caption='[[4hth]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4hth]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HTH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HTH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4hth]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HTH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HTH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3bdc|3bdc]], [[1stn|1stn]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hth FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hth OCA], [https://pdbe.org/4hth PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hth RCSB], [https://www.ebi.ac.uk/pdbsum/4hth PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hth ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hth FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hth OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4hth RCSB], [http://www.ebi.ac.uk/pdbsum/4hth PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
+
[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
==See Also==
==See Also==
-
*[[Staphylococcal nuclease|Staphylococcal nuclease]]
+
*[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Micrococcal nuclease]]
+
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: E., B Garcia-Moreno]]
+
[[Category: Garcia-Moreno E B]]
-
[[Category: Heroux, A]]
+
[[Category: Heroux A]]
-
[[Category: Robinson, A C]]
+
[[Category: Robinson AC]]
-
[[Category: Schlessman, J L]]
+
[[Category: Schlessman JL]]
-
[[Category: Wheeler, E L]]
+
[[Category: Wheeler EL]]
-
[[Category: Hydrolase]]
+
-
[[Category: Hyperstable]]
+
-
[[Category: Nuclease]]
+
-
[[Category: Pdtp]]
+

Current revision

Crystal structure of Staphylococcal nuclease variant Delta+VIAGLA at cryogenic temperature

PDB ID 4hth

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools