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4h5b

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==Crystal Structure of DR_1245 from Deinococcus radiodurans==
==Crystal Structure of DR_1245 from Deinococcus radiodurans==
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<StructureSection load='4h5b' size='340' side='right' caption='[[4h5b]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='4h5b' size='340' side='right'caption='[[4h5b]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4h5b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans_r1 Deinococcus radiodurans r1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H5B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4H5B FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4h5b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H5B FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DR_1245 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243230 Deinococcus radiodurans R1])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h5b OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4h5b RCSB], [http://www.ebi.ac.uk/pdbsum/4h5b PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h5b OCA], [https://pdbe.org/4h5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h5b RCSB], [https://www.ebi.ac.uk/pdbsum/4h5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h5b ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/Q9RUY5_DEIRA Q9RUY5_DEIRA]
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The bacterium Deinococcus radiodurans exhibits an extreme resistance to ionizing radiation. A small subset of Deinococcus genus-specific genes were shown to be up-regulated upon exposure to ionizing radiation and to play a role in genome reconstitution. These genes include an SSB-like protein called DdrB. Here, we identified a novel protein encoded by the dr1245 gene as an interacting partner of DdrB. A strain devoid of the DR1245 protein is impaired in growth, exhibiting a generation time approximately threefold that of the wild type strain while radioresistance is not affected. We determined the three-dimensional structure of DR1245, revealing a relationship with type III secretion system chaperones and YbjN family proteins. Thus, DR1245 may display some chaperone activity towards DdrB and possibly other substrates.
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The Deinococcus radiodurans DR1245 Protein, a DdrB Partner Homologous to YbjN Proteins and Reminiscent of Type III Secretion System Chaperones.,Norais C, Servant P, Bouthier-de-la-Tour C, Coureux PD, Ithurbide S, Vannier F, Guerin PP, Dulberger CL, Satyshur KA, Keck JL, Armengaud J, Cox MM, Sommer S PLoS One. 2013;8(2):e56558. doi: 10.1371/journal.pone.0056558. Epub 2013 Feb 18. PMID:23441204<ref>PMID:23441204</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Deinococcus radiodurans r1]]
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[[Category: Deinococcus radiodurans R1]]
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[[Category: Armengaud, J]]
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[[Category: Large Structures]]
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[[Category: Bouthier-de-la-Tour, C]]
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[[Category: Armengaud J]]
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[[Category: Coureux, P D]]
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[[Category: Bouthier-de-la-Tour C]]
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[[Category: Cox, M M]]
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[[Category: Coureux PD]]
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[[Category: Dulberger, C L]]
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[[Category: Cox MM]]
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[[Category: Guerin, P]]
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[[Category: Dulberger CL]]
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[[Category: Ithurbide, S]]
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[[Category: Guerin P]]
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[[Category: Keck, J L]]
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[[Category: Ithurbide S]]
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[[Category: Norais, C]]
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[[Category: Keck JL]]
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[[Category: Satyshur, K A]]
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[[Category: Norais C]]
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[[Category: Servant, P]]
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[[Category: Satyshur KA]]
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[[Category: Sommer, S]]
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[[Category: Servant P]]
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[[Category: Vannier, F]]
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[[Category: Sommer S]]
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[[Category: Secretion chaperone-like fold]]
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[[Category: Vannier F]]
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[[Category: Unknown function]]
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Current revision

Crystal Structure of DR_1245 from Deinococcus radiodurans

PDB ID 4h5b

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