1u1t
From Proteopedia
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==Hfq protein from Pseudomonas aeruginosa. High-salt crystals== | ==Hfq protein from Pseudomonas aeruginosa. High-salt crystals== | ||
| - | <StructureSection load='1u1t' size='340' side='right' caption='[[1u1t]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='1u1t' size='340' side='right'caption='[[1u1t]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1u1t]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1u1t]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U1T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U1T FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u1t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u1t OCA], [https://pdbe.org/1u1t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u1t RCSB], [https://www.ebi.ac.uk/pdbsum/1u1t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u1t ProSAT], [https://www.topsan.org/Proteins/RSGI/1u1t TOPSAN]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/HFQ_PSEAE HFQ_PSEAE] RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u1/1u1t_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u1/1u1t_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u1t ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 1u1t" style="background-color:#fffaf0;"></div> | ||
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| + | ==See Also== | ||
| + | *[[Protein Hfq|Protein Hfq]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
| - | [[Category: Blaesi | + | [[Category: Blaesi U]] |
| - | [[Category: Garber | + | [[Category: Garber M]] |
| - | [[Category: Kachalova | + | [[Category: Kachalova G]] |
| - | [[Category: Moll | + | [[Category: Moll I]] |
| - | [[Category: Nikonov | + | [[Category: Nikonov SV]] |
| - | [[Category: Nikulin | + | [[Category: Nikulin AD]] |
| - | [[Category: Perederina | + | [[Category: Perederina AA]] |
| - | + | [[Category: Stolboushkina EA]] | |
| - | [[Category: Stolboushkina | + | [[Category: Vassilieva IM]] |
| - | [[Category: Vassilieva | + | [[Category: Vassylyev D]] |
| - | [[Category: Vassylyev | + | [[Category: Yokoyama S]] |
| - | [[Category: Yokoyama | + | |
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Current revision
Hfq protein from Pseudomonas aeruginosa. High-salt crystals
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