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3e54

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==Archaeal Intron-encoded Homing Endonuclease I-Vdi141I Complexed With DNA==
==Archaeal Intron-encoded Homing Endonuclease I-Vdi141I Complexed With DNA==
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<StructureSection load='3e54' size='340' side='right' caption='[[3e54]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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<StructureSection load='3e54' size='340' side='right'caption='[[3e54]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3e54]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Dsm_14429 Dsm 14429]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E54 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E54 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3e54]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vulcanisaeta_distributa Vulcanisaeta distributa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E54 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">23S rRNA intron (Vdi141.L1927) ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=164451 DSM 14429])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e54 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3e54 RCSB], [http://www.ebi.ac.uk/pdbsum/3e54 PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e54 OCA], [https://pdbe.org/3e54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e54 RCSB], [https://www.ebi.ac.uk/pdbsum/3e54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e54 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q6L703_9CREN Q6L703_9CREN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/3e54_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/3e54_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e54 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3e54" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
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*[[Endonuclease|Endonuclease]]
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*[[Endonuclease 3D structures|Endonuclease 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Dsm 14429]]
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[[Category: Large Structures]]
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[[Category: Nomura, N]]
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[[Category: Vulcanisaeta distributa]]
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[[Category: Nomura, Y]]
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[[Category: Nomura N]]
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[[Category: Stoddard, B L]]
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[[Category: Nomura Y]]
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[[Category: Sussman, D]]
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[[Category: Stoddard BL]]
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[[Category: Dna recognition]]
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[[Category: Sussman D]]
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[[Category: Endonuclease]]
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[[Category: Homing]]
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[[Category: Hydrolase-dna complex]]
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[[Category: Laglidadg]]
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[[Category: Protein-dna complex]]
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Current revision

Archaeal Intron-encoded Homing Endonuclease I-Vdi141I Complexed With DNA

PDB ID 3e54

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