This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2v5i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:06, 13 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
==STRUCTURE OF THE RECEPTOR-BINDING PROTEIN OF BACTERIOPHAGE DET7: A PODOVIRAL TAILSPIKE IN A MYOVIRUS==
+
 
-
<StructureSection load='2v5i' size='340' side='right' caption='[[2v5i]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
==Structure of the receptor-binding protein of bacteriophage Det7: a podoviral tailspike in a myovirus==
 +
<StructureSection load='2v5i' size='340' side='right'caption='[[2v5i]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2v5i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified_phage Unidentified phage]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V5I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V5I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2v5i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteriophage_sp. Bacteriophage sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V5I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v5i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2v5i RCSB], [http://www.ebi.ac.uk/pdbsum/2v5i PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v5i OCA], [https://pdbe.org/2v5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v5i RCSB], [https://www.ebi.ac.uk/pdbsum/2v5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v5i ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 15: Line 16:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2v5i" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Tailspike protein 3D structures|Tailspike protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Unidentified phage]]
+
[[Category: Bacteriophage sp]]
-
[[Category: Biebl, M]]
+
[[Category: Large Structures]]
-
[[Category: Fiedler, C]]
+
[[Category: Biebl M]]
-
[[Category: Grassl, R]]
+
[[Category: Fiedler C]]
-
[[Category: Hermo-Parrado, X L]]
+
[[Category: Grassl R]]
-
[[Category: Llamas-Saiz, A L]]
+
[[Category: Hermo-Parrado XL]]
-
[[Category: Miller, S]]
+
[[Category: Llamas-Saiz AL]]
-
[[Category: Raaij, M J.Van]]
+
[[Category: Miller S]]
-
[[Category: Rachel, R]]
+
[[Category: Rachel R]]
-
[[Category: Seckler, R]]
+
[[Category: Seckler R]]
-
[[Category: Walter, M]]
+
[[Category: Walter M]]
-
[[Category: Beta-helix]]
+
[[Category: Van Raaij MJ]]
-
[[Category: O-antigen binding and hydrolysis]]
+
-
[[Category: Viral protein]]
+

Current revision

Structure of the receptor-binding protein of bacteriophage Det7: a podoviral tailspike in a myovirus

PDB ID 2v5i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools