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3pvd

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==Crystal structure of P domain dimer of Norovirus VA207 complexed with 3'-sialyl-Lewis x tetrasaccharide==
==Crystal structure of P domain dimer of Norovirus VA207 complexed with 3'-sialyl-Lewis x tetrasaccharide==
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<StructureSection load='3pvd' size='340' side='right' caption='[[3pvd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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<StructureSection load='3pvd' size='340' side='right'caption='[[3pvd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3pvd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Norovirus_isolates Norovirus isolates]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PVD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3pvd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_calicivirus_NLV/VA97207/1997 Human calicivirus NLV/VA97207/1997]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PVD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PRD_900122:Sialyl-Lewis+X+antigen,+alpha+anomer'>PRD_900122</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3pum|3pum]], [[3pun|3pun]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pvd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pvd OCA], [https://pdbe.org/3pvd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pvd RCSB], [https://www.ebi.ac.uk/pdbsum/3pvd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pvd ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CAPSID ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=150080 Norovirus isolates])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pvd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pvd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pvd RCSB], [http://www.ebi.ac.uk/pdbsum/3pvd PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q91H09_9CALI Q91H09_9CALI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3pvd" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Norovirus isolates]]
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[[Category: Human calicivirus NLV/VA97207/1997]]
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[[Category: Chen, Y]]
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[[Category: Large Structures]]
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[[Category: Hao, N]]
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[[Category: Chen Y]]
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[[Category: Huang, P]]
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[[Category: Hao N]]
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[[Category: Jiang, X]]
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[[Category: Huang P]]
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[[Category: Li, X]]
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[[Category: Jiang X]]
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[[Category: Rao, Z]]
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[[Category: Li X]]
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[[Category: Tan, M]]
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[[Category: Rao Z]]
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[[Category: Xia, M]]
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[[Category: Tan M]]
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[[Category: Zhang, X C]]
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[[Category: Xia M]]
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[[Category: Capsid]]
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[[Category: Zhang XC]]
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[[Category: Carbohydrate/sugar binding]]
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[[Category: Greek key]]
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[[Category: Mixed alpha/beta structure]]
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[[Category: Receptor binding]]
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[[Category: Viral protein]]
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Current revision

Crystal structure of P domain dimer of Norovirus VA207 complexed with 3'-sialyl-Lewis x tetrasaccharide

PDB ID 3pvd

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