This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2gfn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:58, 5 May 2021) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gfn.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of HTH-type transcriptional regulator pksA related protein from Rhodococcus sp. RHA1==
-
|PDB= 2gfn |SIZE=350|CAPTION= <scene name='initialview01'>2gfn</scene>, resolution 1.90&Aring;
+
<StructureSection load='2gfn' size='340' side='right'caption='[[2gfn]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE ION'>CL</scene>
+
<table><tr><td colspan='2'>[[2gfn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhosr Rhosr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GFN FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
|GENE=
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gfn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfn OCA], [https://pdbe.org/2gfn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gfn RCSB], [https://www.ebi.ac.uk/pdbsum/2gfn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfn ProSAT], [https://www.topsan.org/Proteins/MCSG/2gfn TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gfn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gfn ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of HTH-type transcriptional regulator pksA related protein from Rhodococcus sp. RHA1'''
+
==See Also==
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2GFN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFN OCA].
+
[[Category: Large Structures]]
-
[[Category: Rhodococcus sp.]]
+
[[Category: Rhosr]]
-
[[Category: Single protein]]
+
[[Category: Edwards, A]]
-
[[Category: Edwards, A.]]
+
[[Category: Evdokimova, E]]
-
[[Category: Evdokimova, E.]]
+
[[Category: Joachimiak, A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Kagan, O]]
-
[[Category: Kagan, O.]]
+
[[Category: Structural genomic]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Nocek, B]]
-
[[Category: Nocek, B.]]
+
[[Category: Savchenko, A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Hth-type transcriptional regulator]]
-
[[Category: CL]]
+
[[Category: Mcsg]]
-
[[Category: hth-type transcriptional regulator]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: mcsg]]
+
[[Category: Regulatory protein]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Transcription]]
-
[[Category: protein structure initiative]]
+
[[Category: Transcriptional regulator tetr]]
-
[[Category: psi-2]]
+
-
[[Category: regulatory protein]]
+
-
[[Category: structural genomic]]
+
-
[[Category: transcriptional regulator tetr]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:04:06 2008''
+

Current revision

Crystal structure of HTH-type transcriptional regulator pksA related protein from Rhodococcus sp. RHA1

PDB ID 2gfn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools