This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ss7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:08, 29 June 2022) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
 +
==Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution==
==Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution==
-
<StructureSection load='3ss7' size='340' side='right' caption='[[3ss7]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+
<StructureSection load='3ss7' size='340' side='right'caption='[[3ss7]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ss7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SS7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SS7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ss7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SS7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SS7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ss9|3ss9]], [[3gwq|3gwq]], [[3awo|3awo]], [[3awn|3awn]], [[3anv|3anv]], [[3anu|3anu]], [[3roz|3roz]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ss9|3ss9]], [[3gwq|3gwq]], [[3awo|3awo]], [[3awn|3awn]], [[3anv|3anv]], [[3anu|3anu]], [[3roz|3roz]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b2366, dsdA, dsdA b2366JW2393, JW2363 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b2366, dsdA, dsdA b2366JW2393, JW2363 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-serine_ammonia-lyase D-serine ammonia-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.18 4.3.1.18] </span></td></tr>
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/D-serine_ammonia-lyase D-serine ammonia-lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.18 4.3.1.18] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ss7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ss7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ss7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ss7 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ss7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ss7 OCA], [https://pdbe.org/3ss7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ss7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ss7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ss7 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3ss7" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Deaminase|Deaminase]]
+
*[[Deaminase 3D structures|Deaminase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 25: Line 27:
</StructureSection>
</StructureSection>
[[Category: D-serine ammonia-lyase]]
[[Category: D-serine ammonia-lyase]]
-
[[Category: Escherichia coli]]
+
[[Category: Ecoli]]
 +
[[Category: Large Structures]]
[[Category: Antonyuk, S V]]
[[Category: Antonyuk, S V]]
[[Category: Bartunik, H D]]
[[Category: Bartunik, H D]]

Current revision

Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution

PDB ID 3ss7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ss7"
Personal tools