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3vdr

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==Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+)==
==Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+)==
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<StructureSection load='3vdr' size='340' side='right' caption='[[3vdr]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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<StructureSection load='3vdr' size='340' side='right'caption='[[3vdr]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vdr]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3eew 3eew]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VDR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vdr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3eew 3eew]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDR FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3HR:(3R)-3-HYDROXYBUTANOIC+ACID'>3HR</scene>, <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yz7|2yz7]], [[2zea|2zea]], [[3vdq|3vdq]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HR:(3R)-3-HYDROXYBUTANOIC+ACID'>3HR</scene>, <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxybutyrate_dehydrogenase 3-hydroxybutyrate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.30 1.1.1.30] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdr OCA], [https://pdbe.org/3vdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdr RCSB], [https://www.ebi.ac.uk/pdbsum/3vdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdr ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vdr RCSB], [http://www.ebi.ac.uk/pdbsum/3vdr PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D0VWQ0_ALCFA D0VWQ0_ALCFA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3vdr" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: 3-hydroxybutyrate dehydrogenase]]
 
[[Category: Alcaligenes faecalis]]
[[Category: Alcaligenes faecalis]]
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[[Category: Amano, H]]
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[[Category: Large Structures]]
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[[Category: Hoque, M M]]
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[[Category: Amano H]]
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[[Category: Hossain, M T]]
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[[Category: Hoque MM]]
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[[Category: Imamura, S]]
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[[Category: Hossain MT]]
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[[Category: Juan, E C.M]]
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[[Category: Imamura S]]
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[[Category: Sato, Y]]
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[[Category: Juan ECM]]
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[[Category: Sekiguchi, T]]
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[[Category: Sato Y]]
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[[Category: Shimizu, S]]
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[[Category: Sekiguchi T]]
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[[Category: Suzuki, K]]
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[[Category: Shimizu S]]
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[[Category: Takenaka, A]]
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[[Category: Suzuki K]]
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[[Category: Tsunoda, M]]
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[[Category: Takenaka A]]
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[[Category: Yamamoto, T]]
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[[Category: Tsunoda M]]
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[[Category: Ketone body]]
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[[Category: Yamamoto T]]
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[[Category: Nad dependent enzyme]]
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[[Category: Oxidoreductase]]
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Current revision

Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+)

PDB ID 3vdr

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