This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4f24

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:50, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB==
==Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB==
-
<StructureSection load='4f24' size='340' side='right' caption='[[4f24]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
+
<StructureSection load='4f24' size='340' side='right'caption='[[4f24]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4f24]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4F24 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4f24]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_MRSA252 Staphylococcus aureus subsp. aureus MRSA252]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4F24 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.509&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4f1z|4f1z]], [[4f20|4f20]], [[4f27|4f27]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">clfB, SAR2709 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4f24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f24 OCA], [https://pdbe.org/4f24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4f24 RCSB], [https://www.ebi.ac.uk/pdbsum/4f24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4f24 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4f24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f24 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4f24 RCSB], [http://www.ebi.ac.uk/pdbsum/4f24 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CLFB_STAAR CLFB_STAAR] Cell surface-associated protein implicated in virulence by promoting bacterial attachment to both alpha- and beta-chains of human fibrinogen and inducing the formation of bacterial clumps.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4f24" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 23: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Staphylococcus aureus]]
+
[[Category: Large Structures]]
-
[[Category: Chen, Y G]]
+
[[Category: Staphylococcus aureus subsp. aureus MRSA252]]
-
[[Category: Deng, X M]]
+
[[Category: Chen YG]]
-
[[Category: Feng, Y]]
+
[[Category: Deng XM]]
-
[[Category: Liu, B]]
+
[[Category: Feng Y]]
-
[[Category: Liu, L]]
+
[[Category: Liu B]]
-
[[Category: Wang, J W]]
+
[[Category: Liu L]]
-
[[Category: Xiang, H]]
+
[[Category: Wang JW]]
-
[[Category: Yang, M J]]
+
[[Category: Xiang H]]
-
[[Category: Cell adhesion]]
+
[[Category: Yang MJ]]
-
[[Category: Cell surface]]
+
-
[[Category: Ck10]]
+
-
[[Category: Dev-igg fold]]
+

Current revision

Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB

PDB ID 4f24

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools