This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4d26

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:19, 20 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA,ADP and Pi==
==Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA,ADP and Pi==
-
<StructureSection load='4d26' size='340' side='right' caption='[[4d26]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='4d26' size='340' side='right'caption='[[4d26]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4d26]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D26 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D26 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4d26]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D26 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D26 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4d25|4d25]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d26 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d26 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d26 RCSB], [http://www.ebi.ac.uk/pdbsum/4d26 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d26 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d26 OCA], [https://pdbe.org/4d26 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d26 RCSB], [https://www.ebi.ac.uk/pdbsum/4d26 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d26 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O01378_BOMMO O01378_BOMMO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4d26" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cusack, S]]
+
[[Category: Bombyx mori]]
-
[[Category: Kadlec, J]]
+
[[Category: Large Structures]]
-
[[Category: Pillai, R S]]
+
[[Category: Cusack S]]
-
[[Category: Spinelli, P]]
+
[[Category: Kadlec J]]
-
[[Category: Amplifier complex]]
+
[[Category: Pillai RS]]
-
[[Category: Hydrolase]]
+
[[Category: Spinelli P]]
-
[[Category: Pirna]]
+
-
[[Category: Transposon]]
+

Current revision

Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA,ADP and Pi

PDB ID 4d26

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4d26"
Personal tools