This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4o4q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:53, 8 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of the complex formed between type 1 ribosome inactivating protein and uridine diphosphate at 1.81 A resolution==
==Crystal structure of the complex formed between type 1 ribosome inactivating protein and uridine diphosphate at 1.81 A resolution==
-
<StructureSection load='4o4q' size='340' side='right' caption='[[4o4q]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
+
<StructureSection load='4o4q' size='340' side='right'caption='[[4o4q]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4o4q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4O4Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4O4Q FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4o4q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4O4Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4O4Q FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3s9q|3s9q]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/rRNA_N-glycosylase rRNA N-glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.22 3.2.2.22] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4o4q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4o4q OCA], [https://pdbe.org/4o4q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4o4q RCSB], [https://www.ebi.ac.uk/pdbsum/4o4q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4o4q ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4o4q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4o4q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4o4q RCSB], [http://www.ebi.ac.uk/pdbsum/4o4q PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D9J2T9_MOMBA D9J2T9_MOMBA]
 +
 +
==See Also==
 +
*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Momordica balsamina]]
[[Category: Momordica balsamina]]
-
[[Category: RRNA N-glycosylase]]
+
[[Category: Bhushan A]]
-
[[Category: Bhushan, A]]
+
[[Category: Kaur P]]
-
[[Category: Kaur, P]]
+
[[Category: Pandey S]]
-
[[Category: Pandey, S]]
+
[[Category: Sharma S]]
-
[[Category: Sharma, S]]
+
[[Category: Singh TP]]
-
[[Category: Singh, T P]]
+
[[Category: Sinha M]]
-
[[Category: Sinha, M]]
+
[[Category: Yamini S]]
-
[[Category: Yamini, S]]
+
-
[[Category: Complex hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Ligand binding]]
+
-
[[Category: Ribosome inactivating protein]]
+
-
[[Category: Uridine diphosphate]]
+

Current revision

Crystal structure of the complex formed between type 1 ribosome inactivating protein and uridine diphosphate at 1.81 A resolution

PDB ID 4o4q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools