4lfe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:18, 20 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of geranylgeranyl diphosphate synthase sub1274 (target efi-509455) from streptococcus uberis 0140j with bound magnesium and isopentyl diphosphate, partially liganded complex;==
==Crystal structure of geranylgeranyl diphosphate synthase sub1274 (target efi-509455) from streptococcus uberis 0140j with bound magnesium and isopentyl diphosphate, partially liganded complex;==
-
<StructureSection load='4lfe' size='340' side='right' caption='[[4lfe]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
+
<StructureSection load='4lfe' size='340' side='right'caption='[[4lfe]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4lfe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_uberis_0140j Streptococcus uberis 0140j]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LFE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LFE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4lfe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_uberis_0140J Streptococcus uberis 0140J]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LFE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IPE:3-METHYLBUT-3-ENYL+TRIHYDROGEN+DIPHOSPHATE'>IPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4lfg|4lfg]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IPE:3-METHYLBUT-3-ENYL+TRIHYDROGEN+DIPHOSPHATE'>IPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fps, SUB1274 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=218495 Streptococcus uberis 0140J])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lfe OCA], [https://pdbe.org/4lfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lfe RCSB], [https://www.ebi.ac.uk/pdbsum/4lfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lfe ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/(2E,6E)-farnesyl_diphosphate_synthase (2E,6E)-farnesyl diphosphate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.10 2.5.1.10] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lfe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4lfe RCSB], [http://www.ebi.ac.uk/pdbsum/4lfe PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B9DUT7_STRU0 B9DUT7_STRU0]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Streptococcus uberis 0140j]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Streptococcus uberis 0140J]]
-
[[Category: Bhosle, R]]
+
[[Category: Al Obaidi N]]
-
[[Category: Chowdhury, S]]
+
[[Category: Almo SC]]
-
[[Category: EFI, Enzyme Function Initiative]]
+
[[Category: Bhosle R]]
-
[[Category: Evans, B]]
+
[[Category: Chowdhury S]]
-
[[Category: Gerlt, J A]]
+
[[Category: Evans B]]
-
[[Category: Glenn, A Scott]]
+
[[Category: Gerlt JA]]
-
[[Category: Hammonds, J]]
+
[[Category: Hammonds J]]
-
[[Category: Hillerich, B]]
+
[[Category: Hillerich B]]
-
[[Category: Imker, H J]]
+
[[Category: Imker HJ]]
-
[[Category: Love, J]]
+
[[Category: Love J]]
-
[[Category: Obaidi, N Al]]
+
[[Category: Patskovsky Y]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Poulter CD]]
-
[[Category: Poulter, C D]]
+
[[Category: Scott Glenn A]]
-
[[Category: Seidel, R D]]
+
[[Category: Seidel RD]]
-
[[Category: Stead, M]]
+
[[Category: Stead M]]
-
[[Category: Toro, R]]
+
[[Category: Toro R]]
-
[[Category: Washington, E]]
+
[[Category: Washington E]]
-
[[Category: Efi]]
+
-
[[Category: Enzyme function initiative]]
+
-
[[Category: Isoprenoid synthase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of geranylgeranyl diphosphate synthase sub1274 (target efi-509455) from streptococcus uberis 0140j with bound magnesium and isopentyl diphosphate, partially liganded complex;

PDB ID 4lfe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools