This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4kgs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:59, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Backbone Modifications in the Protein GB1 Loops: beta-3-Val21, beta-3-Asp40==
==Backbone Modifications in the Protein GB1 Loops: beta-3-Val21, beta-3-Asp40==
-
<StructureSection load='4kgs' size='340' side='right' caption='[[4kgs]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
+
<StructureSection load='4kgs' size='340' side='right'caption='[[4kgs]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4kgs]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KGS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KGS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4kgs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_sp._'group_G' Streptococcus sp. 'group G']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KGS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=1VR:(3R)-3-AMINO-4-METHYLPENTANOIC+ACID'>1VR</scene>, <scene name='pdbligand=B3D:3-AMINOPENTANEDIOIC+ACID'>B3D</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1VR:(3R)-3-AMINO-4-METHYLPENTANOIC+ACID'>1VR</scene>, <scene name='pdbligand=B3D:3-AMINOPENTANEDIOIC+ACID'>B3D</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4kgr|4kgr]], [[4kgt|4kgt]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kgs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kgs OCA], [https://pdbe.org/4kgs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kgs RCSB], [https://www.ebi.ac.uk/pdbsum/4kgs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kgs ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kgs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kgs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kgs RCSB], [http://www.ebi.ac.uk/pdbsum/4kgs PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SPG1_STRSG SPG1_STRSG] Binds to the constant Fc region of IgG with high affinity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4kgs" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Horne, W S]]
+
[[Category: Large Structures]]
-
[[Category: Lengyel, G A]]
+
[[Category: Streptococcus sp. 'group G']]
-
[[Category: Reinert, Z E]]
+
[[Category: Horne WS]]
-
[[Category: De novo protein]]
+
[[Category: Lengyel GA]]
-
[[Category: Unnatural backbone]]
+
[[Category: Reinert ZE]]

Current revision

Backbone Modifications in the Protein GB1 Loops: beta-3-Val21, beta-3-Asp40

PDB ID 4kgs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools