4kqx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:03, 20 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Mutant Slackia exigua KARI DDV in complex with NAD and an inhibitor==
==Mutant Slackia exigua KARI DDV in complex with NAD and an inhibitor==
-
<StructureSection load='4kqx' size='340' side='right' caption='[[4kqx]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='4kqx' size='340' side='right'caption='[[4kqx]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4kqx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Slackia_exigua_atcc_700122 Slackia exigua atcc 700122]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KQX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KQX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4kqx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Slackia_exigua_ATCC_700122 Slackia exigua ATCC 700122]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KQX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HIO:N-HYDROXY-N-ISOPROPYLOXAMIC+ACID'>HIO</scene>, <scene name='pdbligand=HIS:HISTIDINE'>HIS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4kqw|4kqw]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HIO:N-HYDROXY-N-ISOPROPYLOXAMIC+ACID'>HIO</scene>, <scene name='pdbligand=HIS:HISTIDINE'>HIS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ilvC, HMPREF0762_00954 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=649764 Slackia exigua ATCC 700122])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kqx OCA], [https://pdbe.org/4kqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kqx RCSB], [https://www.ebi.ac.uk/pdbsum/4kqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kqx ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ketol-acid_reductoisomerase Ketol-acid reductoisomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.86 1.1.1.86] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kqx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kqx RCSB], [http://www.ebi.ac.uk/pdbsum/4kqx PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ILVC_SLAES ILVC_SLAES] Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.[HAMAP-Rule:MF_00435]<ref>PMID:23776225</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4kqx" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ketol-acid reductoisomerase 3D structures|Ketol-acid reductoisomerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ketol-acid reductoisomerase]]
+
[[Category: Large Structures]]
-
[[Category: Slackia exigua atcc 700122]]
+
[[Category: Slackia exigua ATCC 700122]]
-
[[Category: Arnold, F H]]
+
[[Category: Arnold FH]]
-
[[Category: Brinkmann-Chen, S]]
+
[[Category: Brinkmann-Chen S]]
-
[[Category: Brustad, E M]]
+
[[Category: Brustad EM]]
-
[[Category: Cahn, J K.B]]
+
[[Category: Cahn JKB]]
-
[[Category: Flock, T]]
+
[[Category: Flock T]]
-
[[Category: Mcintosh, J A]]
+
[[Category: Mcintosh JA]]
-
[[Category: Meinhold, P]]
+
[[Category: Meinhold P]]
-
[[Category: Snow, C D]]
+
[[Category: Snow CD]]
-
[[Category: Zhang, L]]
+
[[Category: Zhang L]]
-
[[Category: Acetohydroxyacid isomeroreductase]]
+
-
[[Category: Cofactor switch]]
+
-
[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
+
-
[[Category: Rossmann fold]]
+

Current revision

Mutant Slackia exigua KARI DDV in complex with NAD and an inhibitor

PDB ID 4kqx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools